RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 A8MU76 341 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 H7BY64 318 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ERI3O43414 337 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ATE1O95260 518 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CH25HO95992 272 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ALDOCP09972 364 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 POLR2HP52434 150 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 EEF1A1P68104 462 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 EEF1A1P5Q5VTE0 462 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SLC15A4Q8N697 577 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 PCNPQ8WW12 178 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SAT2Q96F10 170 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MUS81Q96NY9 551 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 PRAP1Q96NZ9 151 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 LHX3Q9UBR4 397 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 RENP00797 406 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 TIMP1P01033 207 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 UGT2B7P16662 529 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 NT5EP21589 574 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CD34P28906 385 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 NCBP2P52298 156 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CHRFAM7AQ494W8 412 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MANEALQ5VSG8 457 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SH2D5Q6ZV89 423 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CCDC116Q8IYX3 515 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 KDM8Q8N371 416 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 LINC01599Q8WXQ3 324 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 DPH2Q9BQC3 489 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF701Q9NV72 531 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 FAM120CQ9NX05 1096 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ZFR2Q9UPR6 939 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HMGN1P05114 100 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MAOAP21397 527 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 BMPR1AP36894 532 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF41P51814 821 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HACD2Q6Y1H2 254 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 NUDT13Q86X67 352 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SPARTQ8N0X7 666 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 PROKR2Q8NFJ6 384 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 AKR7LQ8NHP1 331 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MED30Q96HR3 178 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SLC35G5Q96KT7 338 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MFFQ9GZY8 342 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ZDHHC11Q9H8X9 412 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 KCNIP2Q9NS61 270 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 IGLV3-10A0A075B6K4 115 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 GLOD5A6NK44 160 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 RFXAPO00287 272 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SLC35G6P0C7Q6 338 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HTR1EP28566 365 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HLA-FP30511 346 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 DNAJA1P31689 397 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 OR1E2P47887 323 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 INHBCP55103 352 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ERN2Q76MJ5 926 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 TCTE3Q8IZS6 198 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 OR8K5Q8NH50 307 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 C2CD4CQ8TF44 421 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 DCUN1D4Q92564 292 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ADIPOR1Q96A54 375 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 MYEOVQ96EZ4 313 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SDHAF2Q9NX18 166 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 TLX2O43763 284 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 PRAMEF2O60811 474 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SULT1C4O75897 302 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 BCHEP06276 602 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 PCSK2P16519 638 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ELK4P28324 431 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HNRNPFP52597 415 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 RAB8AP61006 207 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 CDK6Q00534 326 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HABP2Q14520 560 aaPredicted RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 BAGE3Q86Y29 109 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 BAGE2Q86Y30 109 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM126BQ8IUX1 230 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 OR8J3Q8NGG0 315 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SMPDL3AQ92484 453 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 HIPK2Q9H2X6 1198 aa10.28□□□□□ -0.76
CPNE4-209ENST00000512055 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
CPNE4-209ENST00000512055 SC5DO75845 299 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 IGLV3-25P01717 112 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.76
CPNE4-209ENST00000512055 MAKP20794 623 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 EIF2DP41214 584 aaKnown RBP10.27□□□□□ -0.76
CPNE4-209ENST00000512055 TBPL1P62380 186 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 RFLNAQ6ZTI6 216 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 NEIL3Q8TAT5 605 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 SLC29A1Q99808 456 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 KCNH6Q9H252 994 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 CPNE5Q9HCH3 593 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 CLDND1Q9NY35 253 aa10.27□□□□□ -0.76
CPNE4-209ENST00000512055 PUS1Q9Y606 427 aaKnown RBP eCLIP10.27□□□□□ -0.76
CPNE4-209ENST00000512055 HEPACAM2A8MVW5 462 aa10.27□□□□□ -0.77
CPNE4-209ENST00000512055 IMPA2O14732 288 aa10.27□□□□□ -0.77
CPNE4-209ENST00000512055 NDUFS4O43181 175 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms