RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 KAT2AQ92830 837 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CPNE1Q99829 537 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 C12orf49Q9H741 205 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 FANCFQ9NPI8 374 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF780BQ9Y6R6 833 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 ALPK2Q86TB3 2170 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 CADP27708 2225 aa11.83□□□□□ -0.52
POLR2J3-216ENST00000511773 SYCE1LA8MT33 242 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 EIF1AYO14602 144 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 GP5P40197 560 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 DR1Q01658 176 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 GANABQ14697 944 aaKnown RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 TSC22D1Q15714 1073 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 TMEM249Q2WGJ8 235 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF672Q499Z4 452 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 SH2D4BQ5SQS7 431 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 TTC19Q6DKK2 380 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 ADAM5Q6NVV9 412 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 BEND4Q6ZU67 534 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 STK32CQ86UX6 486 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 SLC44A2Q8IWA5 706 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 CTAGE3PQ8IX95 158 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 L3MBTL4Q8NA19 623 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 KCTD4Q8WVF5 259 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 NXNL1Q96CM4 212 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 CNRIP1Q96F85 164 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 GMPPAQ96IJ6 420 aaPredicted RBP11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 ZBTB26Q9HCK0 441 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 AHSPQ9NZD4 102 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 FLRT3Q9NZU0 649 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 ADAM29Q9UKF5 820 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 PPP2R2CQ9Y2T4 447 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 GPR52Q9Y2T5 361 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 OR10H1Q9Y4A9 318 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 SVEP1Q4LDE5 3571 aa11.82□□□□□ -0.52
POLR2J3-216ENST00000511773 FAM234BA2RU67 622 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 E7ESA3 106 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 LINC01387J3KSC0 135 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 TP73O15350 636 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 WIPF1O43516 503 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 SS18L1O75177 396 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 GUCY1B2O75343 617 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 SIX3O95343 332 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 CLDN9O95484 217 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PTNP21246 168 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PNLIPRP2P54317 469 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ALDH18A1P54886 795 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 CASP9P55211 416 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 IRF9Q00978 393 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF155Q12901 538 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ERCC6LQ2NKX8 1250 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PGGHGQ32M88 737 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF628Q5EBL2 1059 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 NCMAPQ5T1S8 102 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 FRG2Q64ET8 278 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 GGNQ86UU5 652 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 METTL4Q8N3J2 472 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 CEP112Q8N8E3 955 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 OR52B6Q8NGF0 335 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 OR9A2Q8NGT5 310 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PYROXD1Q8WU10 500 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ATP6V1E2Q96A05 226 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 C1GALT1C1Q96EU7 318 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 VSTM2LQ96N03 204 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF681Q96N22 645 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 FRG2BQ96QU4 278 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 SHARPINQ9H0F6 387 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ALG2Q9H553 416 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PTGES2Q9H7Z7 377 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 NOL11Q9H8H0 719 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 BARX1Q9HBU1 254 aaPredicted RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 CPSF2Q9P2I0 782 aaKnown RBP11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 UTS2RQ9UKP6 389 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 PSME2Q9UL46 239 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 SLC12A4Q9UP95 1085 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 AP4B1Q9Y6B7 739 aa11.81□□□□□ -0.52
POLR2J3-216ENST00000511773 TCRBV9S1A1TA0A576 114 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 OR7A17O14581 309 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 NTN1O95631 604 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 ESRRBO95718 433 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 OPN1LWP04000 364 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 ZNF16P17020 682 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 PSMB1P20618 241 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 IL32P24001 234 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 SPRP35270 261 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 CCNG1P51959 295 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 NUDT6P53370 316 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 IFT88Q13099 833 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 IL17RELQ6ZVW7 336 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
POLR2J3-216ENST00000511773 CCDC116Q8IYX3 515 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms