RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 H0Y3Z8 333 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 PLOD2O00469 737 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 ZNF500O60304 480 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 LYPLA1O75608 230 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 SLITRK5O94991 958 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 PSMG1O95456 288 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 EPPINO95925 133 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 BPGMP07738 259 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 BCKDHAP12694 445 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 IGFBP2P18065 325 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 GABRA3P34903 492 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 EVI2BP34910 448 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 MANFP55145 182 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 ZNF844Q08AG5 666 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 HSPB2Q16082 182 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 DECR1Q16698 335 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 NHSL2Q5HYW2 709 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 EXOC3L1Q86VI1 746 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 LACC1Q8IV20 430 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 TRIM42Q8IWZ5 723 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 DMRTC2Q8IXT2 367 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 ACBD4Q8NC06 268 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 RELL2Q8NC24 303 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 METTL2AQ96IZ6 378 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 C3orf30Q96M34 536 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 OR2B2Q9GZK3 357 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 Q9N2J8 555 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 ITGB1BP2Q9UKP3 347 aa13.46□□□□□ -0.25
UBE2D3-228ENST00000508974 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 TYROBPO43914 113 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 ACTL6AO96019 429 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 IL2RAP01589 272 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 FGF4P08620 206 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 PRPS2P11908 318 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 UQCRC1P31930 480 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 GAS1P54826 345 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 DLX5P56178 289 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 MRPS22P82650 360 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 RCAN2Q14206 197 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 NSUN5P2Q63ZY6 315 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 RNF165Q6ZSG1 346 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 MREGQ8N565 214 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 GPR151Q8TDV0 419 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 SLC9A6Q92581 669 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 C14orf79Q96F83 325 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 RMND5BQ96G75 393 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 SFXN2Q96NB2 322 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 TREX2Q9BQ50 279 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 TUBA1CQ9BQE3 449 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF559Q9BR84 538 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 RTN4RQ9BZR6 473 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 DSN1Q9H410 356 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF395Q9H8N7 513 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 MED11Q9P086 117 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 TMED5Q9Y3A6 229 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 OTOGQ6ZRI0 2925 aa13.45□□□□□ -0.26
UBE2D3-228ENST00000508974 ANKRD17O75179 2603 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 DVL2O14641 736 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 HSPA4LO95757 839 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 DPP4P27487 766 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 SRD5A2P31213 254 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 HPCAL1P37235 193 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 ASMTP46597 345 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 ZNF136P52737 540 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 DGKQP52824 942 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 PSPHP78330 225 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 PDE7AQ13946 482 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 PTGR1Q14914 329 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 CYP27C1Q4G0S4 372 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 ATP6AP1LQ52LC2 224 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 XKR7Q5GH72 579 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 CES4AQ5XG92 561 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 ENPP6Q6UWR7 440 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 MARCH3Q86UD3 253 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 NUDCD3Q8IVD9 361 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 UBQLNLQ8IYU4 475 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 C9orf106Q8NAJ2 232 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 FNDC5Q8NAU1 212 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 NUP43Q8NFH3 380 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 OR5M1Q8NGP8 315 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 ZBED6CLQ96FA7 236 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 CHMP6Q96FZ7 201 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 LMF2Q9BU23 707 aaKnown RBP13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 TMEM109Q9BVC6 243 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 MCCC2Q9HCC0 563 aa13.44□□□□□ -0.26
UBE2D3-228ENST00000508974 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
UBE2D3-228ENST00000508974 EEF1E1-BLOC1S5C9J1V9 151 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms