RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CCDC63Q8NA47 563 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 C9orf106Q8NAJ2 232 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 SIMC1Q8NDZ2 872 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 OR7G2Q8NG99 324 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 CEP70Q8NHQ1 597 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 ZFP28Q8NHY6 868 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 MZB1Q8WU39 189 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 YIPF4Q9BSR8 244 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 RBM24Q9BX46 236 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 EBPLQ9BY08 206 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 OXSMQ9NWU1 459 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 FAM120CQ9NX05 1096 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
CCHCR1-227ENST00000508852 MPDZO75970 2070 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 G3V2L1 256 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 COPEO14579 308 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 MSTNO14793 375 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CASKO14936 926 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 HCRTR2O43614 444 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 KCNH1O95259 989 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 PROCP04070 461 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 JUNP05412 331 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CD99P14209 185 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CPA3P15088 417 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 GAS1P54826 345 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 PSG6Q00889 435 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 LIPMQ5VYY2 423 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 NPSR1Q6W5P4 371 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CDC26Q8NHZ8 85 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 SMPDL3BQ92485 455 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 ELP4Q96EB1 424 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 KCNA7Q96RP8 456 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 RHOXF2Q9BQY4 288 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 PIGQQ9BRB3 760 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 CLCF1Q9UBD9 225 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 FBXL2Q9UKC9 423 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 TMED5Q9Y3A6 229 aa12.33□□□□□ -0.44
CCHCR1-227ENST00000508852 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 UBFD1O14562 309 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 ZIC3O60481 467 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 PLIN3O60664 434 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 SEC22BO75396 215 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 SOX30O94993 753 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 PSMG1O95456 288 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 HSPA4LO95757 839 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 IL33O95760 270 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 RAF1P04049 648 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 LCN1P31025 176 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 MC3RP41968 323 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 WNT3P56703 355 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 CLDN18P56856 261 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 RPS3AP61247 264 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 C17orf67Q0P5P2 114 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 DESI1Q6ICB0 168 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 TMEM107Q6UX40 140 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 PAMR1Q6UXH9 720 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 EFHD2Q96C19 240 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 INTS12Q96CB8 462 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 TRIM44Q96DX7 344 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 ZBED6CLQ96FA7 236 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 AMDHD1Q96NU7 426 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 LMF2Q9BU23 707 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 TBL1XR1Q9BZK7 514 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 GLIPR2Q9H4G4 154 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 C1orf109Q9NX04 203 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 PAQR5Q9NXK6 330 aaPredicted RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 EMCNQ9ULC0 261 aa12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 EIF3LQ9Y262 564 aaKnown RBP12.32□□□□□ -0.44
CCHCR1-227ENST00000508852 A0A1W2PPM1 405 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 SLC22A20A6NK97 555 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 A8MXE2 369 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 KDM4EB2RXH2 506 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 UPK1AO00322 258 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 PDPK1O15530 556 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FADS1O60427 444 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 TBX19O60806 448 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FAM153BP0C7A2 387 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 PRPS2P11908 318 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FCGR2AP12318 317 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FOSL1P15407 271 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 HK1P19367 917 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 GPC1P35052 558 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 RPL3P39023 403 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 ASMTP46597 345 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 SLCO1A2P46721 670 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FOXA1P55317 472 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 KEAP1Q14145 624 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 FAM153CQ494X1 144 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 SH2D4BQ5SQS7 431 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 ZCCHC12Q6PEW1 402 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 SH2D5Q6ZV89 423 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 R3HCC1LQ7Z5L2 792 aaKnown RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 NATD1Q8N6N6 113 aa12.31□□□□□ -0.44
CCHCR1-227ENST00000508852 CDRT4Q8N9R6 151 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms