RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ZNF517Q6ZMY9 492 aaPredicted RBP10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 PHC2Q8IXK0 858 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TBC1D19Q8N5T2 526 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TCEANCQ8N8B7 351 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 MFSD9Q8NBP5 474 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 OR6F1Q8NGZ6 308 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 BBS10Q8TAM1 723 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC37A2Q8TED4 501 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 COQ7Q99807 217 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 FNDC11Q9BVV2 318 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC22A4Q9H015 551 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 BCL2L10Q9HD36 194 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ERVK13-1Q9NX77 482 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 CPNE7Q9UBL6 633 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 FBXW2Q9UKT8 454 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC6A14Q9UN76 642 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 ASB4Q9Y574 426 aa10.33□□□□□ -0.76
SH3RF1-203ENST00000508685 IGHV1OR15-9A0A0B4J2B8 117 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 A0A1W2PR48 441 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 TMEM129A0AVI4 362 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CENPXA8MT69 81 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CHURC1-FNTBB4DL54 471 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 M0R129 80 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 HMGN4O00479 90 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CASC3O15234 703 aaKnown RBP10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 GAAP10253 952 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 ALPPL2P10696 532 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 MYL12AP19105 171 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 PTBP1P26599 531 aaKnown RBP eCLIP10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 GIPRP48546 466 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC9A3P48764 834 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 SMSP52788 366 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 RAB40BQ12829 278 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 KIR2DS3Q14952 304 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF750Q32MQ0 723 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 ENTPD8Q5MY95 495 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 C18orf63Q68DL7 685 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 C1orf94Q6P1W5 598 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 DEF8Q6ZN54 512 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 SZRD1Q7Z422 152 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 TAF8Q7Z7C8 310 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CLIP4Q8N3C7 705 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CAPSLQ8WWF8 208 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 ASB15Q8WXK1 588 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC22A18Q96BI1 424 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 SRRQ9GZT4 340 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 FGF20Q9NP95 211 aaPredicted RBP10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 GPR27Q9NS67 375 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 DNAJC27Q9NZQ0 273 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 CAB39Q9Y376 341 aaPredicted RBP10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 V9GYH0 126 aa10.32□□□□□ -0.76
SH3RF1-203ENST00000508685 TDRD6O60522 2096 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 P2RX6O15547 441 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC28A2O43868 658 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ERAL1O75616 437 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 AIFM1O95831 613 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ADRA2AP08913 450 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 PVRP15151 417 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 PPP1CAP62136 330 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TP53BP2Q13625 1128 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 PLK5Q496M5 336 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 DDI2Q5TDH0 399 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 MRM1Q6IN84 353 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 FBXO42Q6P3S6 717 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 METAP1DQ6UB28 335 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF438Q7Z4V0 828 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 NRARPQ7Z6K4 114 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 NLGN4XQ8N0W4 816 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CELF2-AS1Q8N7Q2 184 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TP53INP1Q96A56 240 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 MOAP1Q96BY2 351 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 KCTD7Q96MP8 289 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 AMDHD1Q96NU7 426 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 FAIM2Q9BWQ8 316 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TEX12Q9BXU0 123 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 GSDMCQ9BYG8 508 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 GLIPR2Q9H4G4 154 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC35C2Q9NQQ7 365 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SNTG1Q9NSN8 517 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 EVA1BQ9NVM1 165 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ACTR10Q9NZ32 417 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TESQ9UGI8 421 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CLEC2DQ9UHP7 191 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 A4GNTQ9UNA3 340 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 EXOSC1Q9Y3B2 195 aaKnown RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SCN3AQ9NY46 2000 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 SLC30A4O14863 429 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 GUCY1B2O75343 617 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 HBQ1P09105 142 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 TSPAN19P0C672 248 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 ZNF888P0CJ79 500 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 C8orf89P0DMQ9 161 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 CKMT1AP12532 417 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 IL7P13232 177 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 MAOBP27338 520 aa10.31□□□□□ -0.76
SH3RF1-203ENST00000508685 IFNA8P32881 189 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms