RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 NIPAL3Q6P499 406 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC39A4Q6P5W5 647 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 CENPUQ71F23 418 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 CDC20BQ86Y33 519 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 MARCH9Q86YJ5 346 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC39A11Q8N1S5 342 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 STKLD1Q8NE28 680 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 VN1R17PQ8TDU5 208 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 ADIPOR1Q96A54 375 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 HPDLQ96IR7 371 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 VPS35Q96QK1 796 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 GPA33Q99795 319 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 TBC1D10AQ9BXI6 508 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 COQ10BQ9H8M1 238 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 EXOSC3Q9NQT5 275 aaKnown RBP3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 EPS15L1Q9UBC2 864 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 EIF3LQ9Y262 564 aaKnown RBP3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 MFHAS1Q9Y4C4 1052 aa3.14□□□□□ -1.91
HMGB1P28-201ENST00000507778 A0A1B0GUL7 405 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 PPIHO43447 177 aaKnown RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 BCL2L11O43521 198 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 LANCL1O43813 399 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZNF354AO60765 605 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RAMP1O60894 148 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 NOL3O60936 208 aaKnown RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 GJB5O95377 273 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 H2AFZP0C0S5 128 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 CALCBP10092 127 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 LAMP1P11279 417 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 DSCR10P59022 87 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 LMO4P61968 165 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RUNX3Q13761 415 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 DNAJC21Q5F1R6 531 aaKnown RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 LGSNQ5TDP6 509 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 MEDAGQ5VYS4 303 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RNLSQ5VYX0 342 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 SERINC5Q86VE9 423 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 P2RY8Q86VZ1 359 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 PARGQ86W56 976 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 LYG1Q8N1E2 194 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 TEX9Q8N6V9 391 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RHOXF1Q8NHV9 184 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 UPRTQ96BW1 309 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 THUMPD2Q9BTF0 503 aaKnown RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZNF416Q9BWM5 594 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 HCAR1Q9BXC0 346 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 MRPL13Q9BYD1 178 aaKnown RBP3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 NFKBIZQ9BYH8 718 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 COMMD4Q9H0A8 199 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 WDR76Q9H967 626 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 AGPAT5Q9NUQ2 364 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 ELOVL2Q9NXB9 296 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RDH8Q9NYR8 311 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 AP4B1Q9Y6B7 739 aa3.13□□□□□ -1.91
HMGB1P28-201ENST00000507778 CARMIL1Q5VZK9 1371 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 LRRC30A6NM36 301 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 G3V3Y1 287 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 SDHDO14521 159 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 ANP32DO95626 131 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 GUCA1CO95843 209 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 KRT6BP04259 564 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 ALPIP09923 528 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 H2AFXP16104 143 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 IDSP22304 550 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 HPDP32754 393 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 KIF5BP33176 963 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 OR1D4P47884 311 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 KRT6CP48668 564 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 FNTAP49354 379 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 TAF6P49848 677 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 PAX2Q02962 417 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 IL18R1Q13478 541 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 CAMK4Q16566 473 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 Q1RN00 199 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 TIMM50Q3ZCQ8 353 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 TMEM41BQ5BJD5 291 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 TMEM184AQ6ZMB5 413 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 GCNT7Q6ZNI0 430 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 LRRC70Q7Z2Q7 622 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZNF573Q86YE8 665 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 UNC5CLQ8IV45 518 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 NAXDQ8IW45 347 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 CENPLQ8N0S6 344 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 RSPH1Q8WYR4 309 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 TESK2Q96S53 571 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 GPN2Q9H9Y4 310 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 RPS10P5Q9NQ39 176 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 MEPEQ9NQ76 525 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC35D1Q9NTN3 355 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 GALPQ9UBC7 116 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 SH3BGRL2Q9UJC5 107 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 AP1M2Q9Y6Q5 423 aa3.12□□□□□ -1.91
HMGB1P28-201ENST00000507778 USP6P35125 1406 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 POGZQ7Z3K3 1410 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 A8MX80 341 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 MAPK13O15264 365 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 JAK2O60674 1132 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 JCHAINP01591 159 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms