RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 NPIPA8P0DM63 369 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 RPS19P39019 145 aaKnown RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 RHAGQ02094 409 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 TNFRSF17Q02223 184 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 MEDAGQ5VYS4 303 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 RPLP0P6Q8NHW5 317 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 C10orf90Q96M02 699 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 SARGQ9BW04 601 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 POLDIP3Q9BY77 421 aaKnown RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 LMAN2LQ9H0V9 348 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 ANKHQ9HCJ1 492 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 AP3D1O14617 1153 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 GNSP15586 552 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 PSMA1P25786 263 aaKnown RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 MADCAM1Q13477 382 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 C1DQ13901 141 aaKnown RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 FAM214AQ32MH5 1076 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 NANOGP1Q8N7R0 232 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 OR4K14Q8NGD5 310 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 OR5T3Q8NGG3 340 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 MCHR1Q99705 422 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 TCEAL2Q9H3H9 227 aaPredicted RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 C14orf119Q9NWQ9 140 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 ERVK13-1Q9NX77 482 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 TOR4AQ9NXH8 423 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 YARS2Q9Y2Z4 477 aaKnown RBP20.6■□□□□ 0.89
SPCS3-203ENST00000507678 PIAS3Q9Y6X2 628 aa20.6■□□□□ 0.89
SPCS3-203ENST00000507678 LIMK1P53667 647 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 MFSD12Q6NUT3 480 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 SLC27A4Q6P1M0 643 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 FIGLAQ6QHK4 219 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 ZFP41Q8N8Y5 198 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 TMEM255BQ8WV15 326 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 CAPSLQ8WWF8 208 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 GATAD2BQ8WXI9 593 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 TRNT1Q96Q11 434 aaKnown RBP20.59■□□□□ 0.89
SPCS3-203ENST00000507678 OR2A5Q96R48 311 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 KLHL28Q9NXS3 571 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 CLDND1Q9NY35 253 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 MSRAQ9UJ68 235 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 WDR45Q9Y484 360 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 MED26O95402 600 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 NDUFS1P28331 727 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 TPMTP51580 245 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 SRP54P61011 504 aaKnown RBP20.59■□□□□ 0.89
SPCS3-203ENST00000507678 CDK5Q00535 292 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 SUZ12Q15022 739 aaKnown RBP20.59■□□□□ 0.89
SPCS3-203ENST00000507678 TRAM2Q15035 370 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 OCLNQ16625 522 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 DUSP5Q16690 384 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 ALG11Q2TAA5 492 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 SPANXN2Q5MJ10 180 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 NRMQ8IXM6 262 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 FAM26EQ8N5C1 309 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 HMGB4Q8WW32 186 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 RNFT2Q96EX2 444 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 ACTR10Q9NZ32 417 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 CFL2Q9Y281 166 aa20.59■□□□□ 0.89
SPCS3-203ENST00000507678 SPIN1Q9Y657 262 aaPredicted RBP20.59■□□□□ 0.89
SPCS3-203ENST00000507678 B3GALT2O43825 422 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 RAB36O95755 333 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 HNRNPA2B1P22626 353 aaKnown RBP20.58■□□□□ 0.89
SPCS3-203ENST00000507678 ST3GAL3Q11203 375 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 NDUFA9Q16795 377 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 AGAP7PQ5VUJ5 663 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 FCRL6Q6DN72 434 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 GALNT12Q8IXK2 581 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 OR9Q1Q8NGQ5 310 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 DIO2Q92813 273 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 SLC22A18Q96BI1 424 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 WDR70Q9NW82 654 aa20.58■□□□□ 0.89
SPCS3-203ENST00000507678 TCRBV21S2A2A0A5A6 115 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 AGRPO00253 132 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 GKN3PP0CG01 181 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 KIAA1024LP59773 190 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 IFITM2Q01629 132 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 PUS10Q3MIT2 529 aaKnown RBP20.58■□□□□ 0.88
SPCS3-203ENST00000507678 FRRS1Q6ZNA5 592 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 PIK3R3Q92569 461 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 MS4A4EQ96PG1 132 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 NXF2Q9GZY0 626 aaKnown RBP20.58■□□□□ 0.88
SPCS3-203ENST00000507678 KCMF1Q9P0J7 381 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 LIPT1Q9Y234 373 aa20.58■□□□□ 0.88
SPCS3-203ENST00000507678 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.57■□□□□ 0.88
SPCS3-203ENST00000507678 CELA2BP08218 269 aaPredicted RBP20.57■□□□□ 0.88
SPCS3-203ENST00000507678 MYL12AP19105 171 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 TSFMP43897 325 aaKnown RBP20.57■□□□□ 0.88
SPCS3-203ENST00000507678 PPP1CAP62136 330 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 C19orf48Q6RUI8 117 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 Q6ZSR6 202 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 FLVCR1-AS1Q8TAF5 88 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 GNPDA2Q8TDQ7 276 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 FAM3CQ92520 227 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 FAM131CQ96AQ9 280 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 BARHL1Q9BZE3 327 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 DAPP1Q9UN19 280 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 PEX16Q9Y5Y5 336 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 A0A0C4DFX4 3053 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 TAF4O00268 1085 aa20.57■□□□□ 0.88
SPCS3-203ENST00000507678 THY1P04216 161 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms