RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SLC7A5P2Q9GIP4 190 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 LDAHQ9H6V9 325 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 GLS2Q9UI32 602 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 CARNS1A5YM72 827 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 OR2AG2A6NM03 316 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 FZD7O75084 574 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 EPPINO95925 133 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 CD3GP09693 182 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 CYBAP13498 195 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 NPPBP16860 134 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 RGS7BPQ6MZT1 257 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 OR6T1Q8NGN1 323 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 OR56B4Q8NH76 319 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 MARC2Q969Z3 335 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 C12orf66Q96MD2 445 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 ACTR6Q9GZN1 396 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 SERHL2Q9H4I8 314 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 METTL17Q9H7H0 456 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF275Q9NSD4 429 aaPredicted RBP16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 EMC3Q9P0I2 261 aa16.05■□□□□ 0.16
SQSTM1-211ENST00000506690 KRBOX1C9JBD0 128 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 HPXP02790 462 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 C1GALT1C1LP0DN25 315 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 HMGA1P17096 107 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 KELP23276 732 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SHC1P29353 583 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 PREPP48147 710 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 MMP15P51511 669 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 TPMTP51580 245 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 TBPL1P62380 186 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 CNTN1Q12860 1018 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 ZMYND11Q15326 602 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SYPL1Q16563 259 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 TMEM44Q2T9K0 475 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 KIAA1161Q6NSJ0 714 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 ASPGQ86U10 573 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 LILRA3Q8N6C8 439 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 RPLP0P6Q8NHW5 317 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 FAM83CQ9BQN1 747 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 ISG20L2Q9H9L3 353 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SIRT4Q9Y6E7 314 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 A0A087WUU8 490 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC22A23A1A5C7 686 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 A8MXK9 166 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 MAPK9P45984 424 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 MANFP55145 182 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 OR10A3P58181 314 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 DHODHQ02127 395 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 FAM83HQ6ZRV2 1179 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 TRMT10AQ8TBZ6 339 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF480Q8WV37 535 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 TMEM159Q96B96 161 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SFXN2Q96NB2 322 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 C7orf50Q9BRJ6 194 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SIRT3Q9NTG7 399 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC9A8Q9Y2E8 581 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 SESN1Q9Y6P5 492 aa16.04■□□□□ 0.16
SQSTM1-211ENST00000506690 A0A0G2JK05 382 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 J3QRE1 110 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SURF4O15260 269 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 ANKRD34CP0C6C1 535 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 HTR1FP30939 366 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 BLVRAP53004 296 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 TSPAN31Q12999 210 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SYTL3Q4VX76 610 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 CLEC12AQ5QGZ9 265 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 C3P1Q6ZMU1 363 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 GNPDA2Q8TDQ7 276 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 DACT3Q96B18 629 aaPredicted RBP16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 HHIPL1Q96JK4 782 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SARGQ9BW04 601 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SUV39H2Q9H5I1 410 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 NEUROD4Q9HD90 331 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 MARCH5Q9NX47 278 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 NLGN3Q9NZ94 848 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 ACSL5Q9ULC5 683 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 C4BPBP20851 252 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 TSPAN5P62079 268 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 DGCR2P98153 550 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 LINC00518Q8N0U6 118 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 ZNF527Q8NB42 609 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 HAVCR2Q8TDQ0 301 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SMPDL3AQ92484 453 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 DPYSL5Q9BPU6 564 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 B4GALT6Q9UBX8 382 aa16.03■□□□□ 0.16
SQSTM1-211ENST00000506690 SLC9B1P1A6NJY1 282 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 TSPAN6O43657 245 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 UBL3O95164 117 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 LATS1O95835 1130 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 WDPCPO95876 746 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 TRIM23P36406 574 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 MEF2AQ02078 507 aaPredicted RBP16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 PRKCZQ05513 592 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 LRRC73Q5JTD7 316 aa16.02■□□□□ 0.16
SQSTM1-211ENST00000506690 TCTE1Q5JU00 501 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms