RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PRKACGP22612 351 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 PSMA5P28066 241 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 HTR2AP28223 471 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 PTPN4P29074 926 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 FCGR2CP31995 323 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 MMP12P39900 470 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ID1P41134 155 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 OPRL1P41146 370 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 PTGFRP43088 359 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 HNMTP50135 292 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ARFIP1P53367 373 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NAPAP54920 295 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GNB1P62873 340 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 TCP10Q12799 353 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NFATC2Q13469 925 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC17A1Q14916 467 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 CCDC57Q2TAC2 916 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 HKDC1Q2TB90 917 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 LRIT3Q3SXY7 679 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF876PQ49A33 203 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ACSF3Q4G176 576 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NEPROQ6NW34 567 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 BHLHB9Q6PI77 547 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 LCLAT1Q6UWP7 414 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 C3P1Q6ZMU1 363 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 FRRS1Q6ZNA5 592 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ERASQ7Z444 233 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 P4HA3Q7Z4N8 544 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GPR142Q7Z601 462 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 TMEM110Q86TL2 294 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 CUZD1Q86UP6 607 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 RANBP3LQ86VV4 465 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 CATSPERDQ86XM0 798 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 PYROXD2Q8N2H3 581 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 BANPQ8N9N5 519 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 RELL2Q8NC24 303 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 STKLD1Q8NE28 680 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF397Q8NF99 534 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 NUP37Q8NFH4 326 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 OR10G7Q8NGN6 311 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 MCHR2Q969V1 340 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 LRR1Q96L50 414 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF300Q96RE9 604 aaPredicted RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 USP28Q96RU2 1077 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 RBM24Q9BX46 236 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 MRPL13Q9BYD1 178 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 WDR13Q9H1Z4 485 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 SPHK2Q9NRA0 654 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 PLCXD1Q9NUJ7 323 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 GDAP2Q9NXN4 497 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 EXTL2Q9UBQ6 330 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 ATP6V1HQ9UI12 483 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 XPO7Q9UIA9 1087 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 MRPS28Q9Y2Q9 187 aaKnown RBP2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 KLHDC2Q9Y2U9 406 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 FKBP7Q9Y680 259 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 IKBKGQ9Y6K9 419 aa2.74□□□□□ -1.97
TRAPPC11-205ENST00000506426 CUL9Q8IWT3 2517 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PSME4Q14997 1843 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRIM49BA6NDI0 452 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 WASH3PC4AMC7 463 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 K7EQD1 137 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 FRAT2O75474 233 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ASNSP08243 561 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ANXA4P09525 319 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC35G4P0C7Q5 338 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 CYP11B1P15538 503 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 AOC1P19801 751 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PDHA2P29803 388 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ADORA1P30542 326 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 MAT2AP31153 395 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SGSHP51688 502 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PPIAP62937 165 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 NOP14P78316 857 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 HMGN5P82970 282 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 NAAAQ02083 359 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SRYQ05066 204 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SNTB2Q13425 540 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 TRIP10Q15642 601 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 MLF2Q15773 248 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 DCAF4L1Q3SXM0 396 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 POM121L1PQ3SYA9 428 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 USH1GQ495M9 461 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 SLC36A3Q495N2 470 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 NADK2Q4G0N4 442 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ZNF311Q5JNZ3 666 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 TCHHL1Q5QJ38 904 aaPredicted RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ADAMTSL4-AS1Q5T5F5 129 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 ATAD3BQ5T9A4 648 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 NCR3LG1Q68D85 454 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 APOBEC3HQ6NTF7 200 aaKnown RBP2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 RHBDD2Q6NTF9 364 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 NIPAL3Q6P499 406 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 CES3Q6UWW8 571 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 WASH2PQ6VEQ5 465 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 Q6ZRP5 223 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 RGS9BPQ6ZS82 235 aa2.73□□□□□ -1.97
TRAPPC11-205ENST00000506426 PAQR9Q6ZVX9 377 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms