RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 PDCD1Q15116 288 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 TMED2Q15363 201 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SPRED3Q2MJR0 410 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 LRRC38Q5VT99 294 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ITPRIPL1Q6GPH6 555 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 OR5M10Q6IEU7 315 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PEX26Q7Z412 305 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RNF144BQ7Z419 303 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 GALNT10Q86SR1 603 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 P2RY8Q86VZ1 359 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 VSIG1Q86XK7 387 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RIBC1Q8N443 379 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RNF10Q8N5U6 811 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF433Q8N7K0 673 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 FADS6Q8N9I5 356 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 WDR31Q8NA23 367 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZSCAN4Q8NAM6 433 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SPC24Q8NBT2 197 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 WFDC9Q8NEX5 89 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 OR5M1Q8NGP8 315 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 OR52N5Q8NH56 324 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 FAM110BQ8TC76 370 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RNF128Q8TEB7 428 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ABHD3Q8WU67 409 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 STYXQ8WUJ0 223 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 POP5Q969H6 163 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PPWD1Q96BP3 646 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MS4A6EQ96DS6 147 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 BIRC8Q96P09 236 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PPP1R2P1Q96PQ5 205 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 NPAS1Q99742 590 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 BAG1Q99933 345 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ERVK-6Q9BXR3 956 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 PACSIN1Q9BY11 444 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 DDX47Q9H0S4 455 aaKnown RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 RAB1BQ9H0U4 201 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 GBA3Q9H227 469 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 C16orf95Q9H693 158 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF665Q9H7R5 613 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 METTL7AQ9H8H3 244 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MARCH7Q9H992 704 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ZBTB26Q9HCK0 441 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SNX15Q9NRS6 342 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 GLRX2Q9NS18 164 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 MARCH4Q9P2E8 410 aaPredicted RBP2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SLC17A6Q9P2U8 582 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 SLC2A6Q9UGQ3 507 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ADAM29Q9UKF5 820 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 ERVK-19Q9WJR5 959 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 TRAF6Q9Y4K3 522 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
TCOF1-208ENST00000506063 NUP214P35658 2090 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PPIAL4EA0A075B759 164 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PPIAL4CA0A0B4J2A2 164 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 C2orf92A0A1B0GVN3 265 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 C1orf226A1L170 272 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PRAMEF25A6NGN4 478 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR6C76A6NM76 312 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 EFCAB8A8MWE9 144 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MIF4GDA9UHW6 222 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PPIAL4DF5H284 164 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 H3BML4 177 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 APOC4-APOC2K7ER74 178 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 M0R1B8 84 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PRMT5O14744 637 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ADAMDEC1O15204 470 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 MGRN1O60291 552 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NIPSNAP2O75323 286 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NCR1O76036 304 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 ZFPL1O95159 310 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GOT2P00505 430 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PLGP00747 810 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 LHBP01229 141 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 IGHV2-5P01817 119 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 APOC2P02655 101 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 HPXP02790 462 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SERPIND1P05546 499 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SERPINA6P08185 405 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC175P0C221 793 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR4A8P0C604 315 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SLC35E2P0CK97 266 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PPIAL4FP0DN26 164 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TNNI3P19429 210 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GGT1P19440 569 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 COMTP21964 271 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RPS3P23396 243 aaKnown RBP eCLIP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 KDELR1P24390 212 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CERS1P27544 350 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 PSMB4P28070 264 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 SSTR4P31391 388 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 CTNNA1P35221 906 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RPL4P36578 427 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 EIF1AXP47813 144 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 OR3A2P47893 321 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 NR2C2P49116 596 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 TMED10P49755 219 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 GEMP55040 296 aa2.85□□□□□ -1.95
TCOF1-208ENST00000506063 HADHBP55084 474 aaKnown RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 FOXG1P55316 489 aaPredicted RBP2.85□□□□□ -1.95
TCOF1-208ENST00000506063 RWDD2BP57060 319 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms