RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ZNF562Q6V9R5 426 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 GET4Q7L5D6 327 aaPredicted RBP2.67□□□□□ -1.98
CHD1-203ENST00000505657 LINC01006Q8NI28 216 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 U2AF1L4Q8WU68 220 aaKnown RBP2.67□□□□□ -1.98
CHD1-203ENST00000505657 TMEM237Q96Q45 408 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 C19orf24Q9BVV8 132 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 DUS2Q9NX74 493 aaKnown RBP2.67□□□□□ -1.98
CHD1-203ENST00000505657 ELOVL2Q9NXB9 296 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 KCNN3Q9UGI6 736 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 DUSP12Q9UNI6 340 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 NUDCQ9Y266 331 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 DHRS7Q9Y394 339 aa2.67□□□□□ -1.98
CHD1-203ENST00000505657 FBLL1A6NHQ2 334 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 HTATSF1O43719 755 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 HSPB1P04792 205 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 IGFBP1P08833 259 aaPredicted RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 CCDC166P0CW27 439 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 SFNP31947 248 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 MRPS6P82932 125 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 RFTN1Q14699 578 aaPredicted RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 C2orf83Q53S99 150 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 BEND6Q5SZJ8 279 aaPredicted RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 IL23RQ5VWK5 629 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 DMKNQ6E0U4 476 aaPredicted RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 TMEM26Q6ZUK4 368 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 PAQR9Q6ZVX9 377 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 TAF8Q7Z7C8 310 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 ARNTL2Q8WYA1 636 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 ART4Q93070 314 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 ADIPOR1Q96A54 375 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 SLC25A36Q96CQ1 311 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 SLC25A38Q96DW6 304 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 FAM122AQ96E09 287 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 XPO4Q9C0E2 1151 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 ZNF702PQ9H963 129 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 ISG20L2Q9H9L3 353 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 GHRLQ9UBU3 117 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 CLIP2Q9UDT6 1046 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 CCPG1Q9ULG6 757 aa2.66□□□□□ -1.98
CHD1-203ENST00000505657 EXOSC1Q9Y3B2 195 aaKnown RBP2.66□□□□□ -1.98
CHD1-203ENST00000505657 BICDL2A1A5D9 508 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 CFAP73A6NFT4 308 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 TM9SF1O15321 606 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 ZBTB14O43829 449 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 PGK1P00558 417 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 IGHV3-23P01764 117 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 ZP3P21754 424 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 OR3A4PP47883 348 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 HTR5AP47898 357 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 P2RY4P51582 365 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 RIPPLY3P57055 190 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 RPS8P62241 208 aaKnown RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 UBE2V2Q15819 145 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 CAMK4Q16566 473 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 PAGE2BQ5JRK9 111 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 ZNF658Q5TYW1 1059 aaPredicted RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 MEDAGQ5VYS4 303 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 SLX4IPQ5VYV7 408 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 P4HA3Q7Z4N8 544 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 SLC13A3Q8WWT9 602 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 FRAT1Q92837 279 aaPredicted RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 C18orf25Q96B23 403 aaPredicted RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 CYYR1Q96J86 154 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 NOL4LQ96MY1 436 aaPredicted RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 TECTBQ96PL2 329 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 RUFY1Q96T51 708 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 NACA2Q9H009 215 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 GDAP2Q9NXN4 497 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 ODF2LQ9ULJ1 636 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 ISY1Q9ULR0 285 aaKnown RBP2.65□□□□□ -1.99
CHD1-203ENST00000505657 FLVCR1Q9Y5Y0 555 aa2.65□□□□□ -1.99
CHD1-203ENST00000505657 RAI1Q7Z5J4 1906 aaPredicted RBP2.64□□□□□ -1.99
CHD1-203ENST00000505657 TTC26A0AVF1 554 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 FAM231BA6NCW3 169 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 ARHGAP42A6NI28 874 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 B4DXG7 233 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 H0Y9J4 135 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 ALOX15BO15296 676 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 PPIHO43447 177 aaKnown RBP2.64□□□□□ -1.99
CHD1-203ENST00000505657 ZNF254O75437 659 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 SERF1AO75920 110 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 JCHAINP01591 159 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 ALPPP05187 535 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 SLC35G4P0C7Q5 338 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 ALPPL2P10696 532 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 CPN1P15169 458 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 TSPAN8P19075 237 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 PTMSP20962 102 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 PTPN6P29350 595 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 TRPC1P48995 793 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 EFNA3P52797 238 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 DIO3P55073 304 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 LIM2P55344 173 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 HERVK_113P63132 956 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 ERVK-8P63133 956 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 PLOD1Q02809 727 aaPredicted RBP2.64□□□□□ -1.99
CHD1-203ENST00000505657 DPYSL3Q14195 570 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 CNSTQ6PJW8 725 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 BTNL3Q6UXE8 466 aa2.64□□□□□ -1.99
CHD1-203ENST00000505657 Q6ZVH6 145 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms