RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NECTIN3Q9NQS3 549 aa20.47■□□□□ 0.87
PTPN13-205ENST00000502971 ATXN7L1Q9ULK2 861 aaPredicted RBP20.47■□□□□ 0.87
PTPN13-205ENST00000502971 HEMK1Q9Y5R4 338 aaPredicted RBP20.47■□□□□ 0.87
PTPN13-205ENST00000502971 TTC36A6NLP5 189 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 KIAA0513O60268 411 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 PRAMEF2O60811 474 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 EPHA2P29317 976 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 IFNA8P32881 189 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 OR1D4P47884 311 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 CCL7P80098 99 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 FUT7Q11130 342 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF267Q14586 743 aaPredicted RBP20.46■□□□□ 0.87
PTPN13-205ENST00000502971 GPR68Q15743 365 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF566Q969W8 418 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 ZNF304Q9HCX3 659 aa20.46■□□□□ 0.87
PTPN13-205ENST00000502971 DHCR7Q9UBM7 475 aaKnown RBP20.46■□□□□ 0.87
PTPN13-205ENST00000502971 CABIN1Q9Y6J0 2220 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 A0A1B0GX78 115 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 SH3PXD2BA1X283 911 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 ARHGAP33O14559 1287 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 BRINP1O60477 761 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 IFNA16P05015 189 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 RPLP0P05388 317 aaKnown RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 CCDC159P0C7I6 412 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 FBLP22087 321 aaKnown RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 SSTR4P31391 388 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 CXCR4P61073 352 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 EEF1A1P68104 462 aaKnown RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 PSG6Q00889 435 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 ACY1Q03154 408 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 SEC23BQ15437 767 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 TRIM61Q5EBN2 209 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 LAIR2Q6ISS4 152 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 ZNF836Q6ZNA1 936 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 QSOX2Q6ZRP7 698 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 ARHGAP22Q7Z5H3 698 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 GTPBP3Q969Y2 492 aaKnown RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 CNDP2Q96KP4 475 aaKnown RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 VSTM2LQ96N03 204 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 LRRN3Q9H3W5 708 aa20.45■□□□□ 0.86
PTPN13-205ENST00000502971 GPR55Q9Y2T6 319 aaPredicted RBP20.45■□□□□ 0.86
PTPN13-205ENST00000502971 A0A1W2PQM1 296 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 GXYLT2A0PJZ3 443 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 HYAL3O43820 417 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 OR10H3O60404 316 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 SYPP08247 313 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 GGT2P36268 569 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 TAS2R41P59536 307 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 ESRRGP62508 458 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 ZNF773Q6PK81 442 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 TMPRSS9Q7Z410 1059 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 CLIP4Q8N3C7 705 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 SLC7A13Q8TCU3 470 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 PTCHD1Q96NR3 888 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 DGCR6LQ9BY27 220 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 ANKRD19PQ9H560 264 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 SRPK3Q9UPE1 567 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 PCDHGA6Q9Y5G7 932 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 SPTBP11277 2137 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 OR2W5A6NFC9 320 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 PATE3B3GLJ2 98 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 SLC1A7O00341 560 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 AP3D1O14617 1153 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 KCNK2O95069 426 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 CCNYL3P0C7X3 344 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 TNNI3P19429 210 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 EEF1B2P24534 225 aaKnown RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 RGS8P57771 180 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 FOXD4Q12950 439 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 MAD2L1BPQ15013 274 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 CLPPQ16740 277 aaPredicted RBP20.44■□□□□ 0.86
PTPN13-205ENST00000502971 PRAMEF17Q5VTA0 474 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 PODNL1Q6PEZ8 512 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 BORAQ6PGQ7 559 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 FIGNL1Q6PIW4 674 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 KLHL17Q6TDP4 642 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 OR7G1Q8NGA0 311 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 CNPPD1Q9BV87 410 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 UCK2Q9BZX2 261 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 OR10A5Q9H207 317 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 EVA1AQ9H8M9 152 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 MAN2C1Q9NTJ4 1040 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 ERVK-19Q9WJR5 959 aa20.44■□□□□ 0.86
PTPN13-205ENST00000502971 HRKO00198 91 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 ANGPTL1O95841 491 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 NID1P14543 1247 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 POU2F1P14859 743 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 AGXTP21549 392 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 TRHRP34981 398 aaPredicted RBP20.43■□□□□ 0.86
PTPN13-205ENST00000502971 UGT2B15P54855 530 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 BROXQ5VW32 411 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 PGBD2Q6P3X8 592 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 CCDC71Q8IV32 467 aaPredicted RBP20.43■□□□□ 0.86
PTPN13-205ENST00000502971 CNIH3Q8TBE1 160 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 ARMC7Q9H6L4 198 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 PRODH2Q9UF12 536 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 NINQ8N4C6 2090 aa20.43■□□□□ 0.86
PTPN13-205ENST00000502971 ADAMTS20P59510 1910 aa20.42■□□□□ 0.86
PTPN13-205ENST00000502971 UNC13CQ8NB66 2214 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms