RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 ENTPD8Q5MY95 495 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 ATXN7L2Q5T6C5 722 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 RSBN1Q5VWQ0 802 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 ZNF517Q6ZMY9 492 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 QSOX2Q6ZRP7 698 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 RTL10Q7L3V2 364 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 TRIM69Q86WT6 500 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 APCDD1Q8J025 514 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 GPR32P1Q8NGA4 272 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 GRPEL2Q8TAA5 225 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 TMEM163Q8TC26 289 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SPPL3Q8TCT6 385 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SH3KBP1Q96B97 665 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 VPS35Q96QK1 796 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SERINC2Q96SA4 455 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 COPS8Q99627 209 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 CHCHD6Q9BRQ6 235 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 MND1Q9BWT6 205 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 GTPBP2Q9BX10 602 aaKnown RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 SGPP1Q9BX95 441 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SLC22A4Q9H015 551 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 NMNAT1Q9HAN9 279 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 GKN1Q9NS71 199 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 ZNF275Q9NSD4 429 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 MRPL39Q9NYK5 338 aaKnown RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 STOX2Q9P2F5 926 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 CRLS1Q9UJA2 301 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.68□□□□□ -1.82
CLTC-209ENST00000498711 SNX7Q9UNH6 387 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 DUSP12Q9UNI6 340 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SLC22A14Q9Y267 594 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 HS3ST2Q9Y278 367 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 YBX2Q9Y2T7 364 aaKnown RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 RPL36Q9Y3U8 105 aaKnown RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 KIF26AQ9ULI4 1882 aaPredicted RBP3.68□□□□□ -1.82
CLTC-209ENST00000498711 REV3LO60673 3130 aa3.68□□□□□ -1.82
CLTC-209ENST00000498711 SCN5AQ14524 2016 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TRDV1A0A1B0GX56 115 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TMEM129A0AVI4 362 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 MBD3L4A6NDZ8 208 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 MBD3L3A6NE82 208 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 CENPXA8MT69 81 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ARHGEF33A8MVX0 844 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 K7ERQ8 282 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TLR4O00206 839 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 QSOX1O00391 747 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ADAM12O43184 909 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ENTPD6O75354 484 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 SLC43A1O75387 559 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 LRATO95237 230 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 CPSF4O95639 269 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 C1QBP02746 253 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 UQCRC2P22695 453 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ERP29P30040 261 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 PKLRP30613 574 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 KIR2DL3P43628 341 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 GSTM5P46439 218 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 LIM2P55344 173 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 CLDN20P56880 219 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 GNG2P59768 71 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 BTG1P62324 171 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 HBA1P69905 142 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ZXDBP98169 803 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 CDK6Q00534 326 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 COX10Q12887 443 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 SPHARQ15513 63 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ATP13A5Q4VNC0 1218 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 PHF19Q5T6S3 580 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 LAMTOR1Q6IAA8 161 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 LINGO4Q6UY18 593 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TMPRSS11AQ6ZMR5 421 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 WDR53Q7Z5U6 358 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 TECPR1Q7Z6L1 1165 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 GALNT10Q86SR1 603 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TSPAN33Q86UF1 283 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 MOGAT3Q86VF5 341 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 LINC00471Q8N535 108 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 ARIH2OSQ8N7S6 290 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 MAFAQ8NHW3 353 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 HUS1BQ8NHY5 278 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 GPR151Q8TDV0 419 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 C16orf78Q8WTQ4 265 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 NEURL3Q96EH8 262 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 CDX2Q99626 313 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 COQ7Q99807 217 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 MARVELD1Q9BSK0 173 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 WRAP53Q9BUR4 548 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 VN1R3Q9BXE9 311 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 UCK2Q9BZX2 261 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 C11orf54Q9H0W9 315 aaPredicted RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 NT5DC2Q9H857 520 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 RMI1Q9H9A7 625 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 TXNL4BQ9NX01 149 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 TBC1D14Q9P2M4 693 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 PHF11Q9UIL8 331 aa3.67□□□□□ -1.82
CLTC-209ENST00000498711 EXOGQ9Y2C4 368 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 RBMX2Q9Y388 322 aaKnown RBP3.67□□□□□ -1.82
CLTC-209ENST00000498711 ASB4Q9Y574 426 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms