RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CHMP6Q96FZ7 201 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 C7orf26Q96N11 449 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 SORT1Q99523 831 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 RBM4BQ9BQ04 359 aaKnown RBP4.7□□□□□ -1.66
FXN-205ENST00000498653 UTP23Q9BRU9 249 aaKnown RBP4.7□□□□□ -1.66
FXN-205ENST00000498653 CNPPD1Q9BV87 410 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 ELOVL6Q9H5J4 265 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 NT5DC2Q9H857 520 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 GP6Q9HCN6 339 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 SH2D2AQ9NP31 389 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 PNPOQ9NVS9 261 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 GFOD1Q9NXC2 390 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 ZNF629Q9UEG4 869 aaPredicted RBP4.7□□□□□ -1.66
FXN-205ENST00000498653 ZDHHC2Q9UIJ5 367 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 HAO1Q9UJM8 370 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 SERTAD3Q9UJW9 196 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 KLHL20Q9Y2M5 609 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 FIS1Q9Y3D6 152 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 TRAF6Q9Y4K3 522 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 KLK4Q9Y5K2 254 aa4.7□□□□□ -1.66
FXN-205ENST00000498653 HSPG2P98160 4391 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 A0A0J9YVX5 310 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SHISA3A0PJX4 238 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 FEZF1A0PJY2 475 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ANKRD34BA5PLL1 514 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 GMNCA6NCL1 334 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 OR14I1A6ND48 311 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 VSTM2BA6NLU5 285 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TRPC5OSA6NMA1 111 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 H0YIV9 168 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 KLRC4-KLRK1H3BQV0 150 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SLC28A1O00337 649 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 HS3ST1O14792 307 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 HDAC3O15379 428 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 LCMT2O60294 686 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 ZNF354AO60765 605 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 PRAMEF4O60810 478 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ULK1O75385 1050 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SLC25A12O75746 678 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SERPIND1P05546 499 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 GSNP06396 782 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TROVE2P10155 538 aaKnown RBP eCLIP4.69□□□□□ -1.66
FXN-205ENST00000498653 KITP10721 976 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SLC25A16P16260 332 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CD22P20273 847 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 DPP4P27487 766 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 GSTM2P28161 218 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SERPINB3P29508 390 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ARRB2P32121 409 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 LSP1P33241 339 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 AHRP35869 848 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 BCL6P41182 706 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 PIK3CBP42338 1070 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 UBA52P62987 128 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 EEF1A2Q05639 463 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 DDX39BQ13838 428 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 E2F2Q14209 437 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZIC1Q15915 447 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 MAPKAPK3Q16644 382 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 IMPG1Q17R60 797 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SGO1Q5FBB7 561 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 PRAMEF9Q5VWM5 478 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 KANK2Q63ZY3 851 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 FRG2Q64ET8 278 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CLEC6AQ6EIG7 209 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SCIMPQ6UWF3 145 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 RNF44Q7L0R7 432 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 MEPCEQ7L2J0 689 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 PLD3Q8IV08 490 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 WDR75Q8IWA0 830 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 DDIASQ8IXT1 998 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.69□□□□□ -1.66
FXN-205ENST00000498653 LAS2Q8IYD9 372 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 LRRC34Q8IZ02 419 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 DNAJC22Q8N4W6 341 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CAMKVQ8NCB2 501 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZNF740Q8NDX6 193 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TRPV3Q8NET8 790 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 OR7G3Q8NG95 312 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 WDR20Q8TBZ3 569 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CREB3L4Q8TEY5 395 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 TWIST2Q8WVJ9 160 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 SELENOMQ8WWX9 145 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 DDB2Q92466 427 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 RERGQ96A58 199 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 QRFPRQ96P65 431 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 ZNF317Q96PQ6 595 aaPredicted RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 FRG2BQ96QU4 278 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 KCNA7Q96RP8 456 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SERPINI1Q99574 410 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CCT7Q99832 543 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 SOX7Q9BT81 388 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CRB3Q9BUF7 120 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 C20orf27Q9GZN8 174 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 CHRNA10Q9GZZ6 450 aa4.69□□□□□ -1.66
FXN-205ENST00000498653 NSRP1Q9H0G5 558 aaKnown RBP4.69□□□□□ -1.66
FXN-205ENST00000498653 SPNS1Q9H2V7 528 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms