RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 S100A6P06703 90 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SLC35G4P0C7Q5 338 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE12FP0CL80 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE12GP0CL81 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE12IP0CL82 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ETS2P15036 469 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GPD1P21695 349 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SSTR2P30874 369 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 MAT2AP31153 395 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 OTX1P32242 354 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 PLA2G5P39877 138 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 MLLT10P55197 1068 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 YWHAGP61981 247 aaKnown RBP eCLIP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 RPS4XP62701 263 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CNTN1Q12860 1018 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE1Q13065 139 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GAGE4Q13068 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 GRB14Q14449 540 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 RBM39Q14498 530 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 EXT1Q16394 746 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 LRRC37A5PQ49AS3 106 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SBK1Q52WX2 424 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 TEX44Q53QW1 395 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SFT2D3Q587I9 215 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 FNDC7Q5VTL7 733 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 OR7E24Q6IFN5 339 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF562Q6V9R5 426 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 Q7L0L9 218 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SPRED1Q7Z699 444 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CTU1Q7Z7A3 348 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ITIH5Q86UX2 942 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 NAGSQ8N159 534 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CLDN19Q8N6F1 224 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ASCC1Q8N9N2 400 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 OR1J1Q8NGS3 322 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CLHC1Q8NHS4 586 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SMPDL3AQ92484 453 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SLC38A4Q969I6 547 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 TOP1MTQ969P6 601 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 MYLPFQ96A32 169 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF479Q96JC4 524 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 COPS8Q99627 209 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 LLPHQ9BRT6 129 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 DCTN5Q9BTE1 182 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 FUCA2Q9BTY2 467 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 ST6GALNAC5Q9BVH7 336 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 LAT2Q9GZY6 243 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CXXC4Q9H2H0 198 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 LRRN3Q9H3W5 708 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 KRCC1Q9NPI7 259 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 POLE4Q9NR33 117 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 FGF21Q9NSA1 209 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 POT1Q9NUX5 634 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 MED17Q9NVC6 651 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SLC17A6Q9P2U8 582 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SLC6A5Q9Y345 797 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 FKBP7Q9Y680 259 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 MON2Q7Z3U7 1717 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 SLIT3O75094 1523 aa5.42□□□□□ -1.54
BRCA1-224ENST00000497488 PDS5AQ29RF7 1337 aaKnown RBP5.42□□□□□ -1.54
BRCA1-224ENST00000497488 CDK12Q9NYV4 1490 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 NWD2Q9ULI1 1742 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 A0A1W2PPV4 95 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ERICH2A1L162 156 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 A8MVM7 634 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 HHLA1C9JL84 531 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 IMPA2O14732 288 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 OR2F2O95006 317 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MBP02144 154 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 CCNB1P14635 433 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 DARSP14868 501 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TBXA2RP21731 343 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 CA4P22748 312 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 HNRNPH3P31942 346 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 RFX5P48382 616 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 OSTNP61366 133 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 CDKL1Q00532 357 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 SLAQ13239 276 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TFDP1Q14186 410 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF829Q3KNS6 432 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MLIPQ5VWP3 458 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TRNP1Q6NT89 227 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 VITQ6UXI7 678 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TMEM184AQ6ZMB5 413 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 DBX2Q6ZNG2 339 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 SSX9Q7RTT3 188 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 H2BFWTQ7Z2G1 175 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 PIWIL4Q7Z3Z4 852 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 NET1Q7Z628 596 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 SCD5Q86SK9 330 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 DHDDSQ86SQ9 333 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF554Q86TJ5 538 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ACOT1Q86TX2 421 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 CACUL1Q86Y37 369 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 DCP1BQ8IZD4 617 aaKnown RBP5.41□□□□□ -1.54
BRCA1-224ENST00000497488 ELMOD1Q8N336 334 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TEX26Q8N6G2 289 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 MFSD9Q8NBP5 474 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 TRPV1Q8NER1 839 aa5.41□□□□□ -1.54
BRCA1-224ENST00000497488 STXBP6Q8NFX7 210 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms