RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 PFKFB1P16118 471 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 PTBP1P26599 531 aaKnown RBP eCLIP4.24□□□□□ -1.73
XPA-204ENST00000496104 CYLC1P35663 651 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 WNT5AP41221 380 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 MAGEA8P43361 318 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ZFP36L2P47974 494 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 ZNF75DP51815 510 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 DCDP81605 110 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 TNFRSF17Q02223 184 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 COL10A1Q03692 680 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 MZT1Q08AG7 82 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 DUSP8Q13202 625 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 TUBA3CQ13748 450 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ACKR1Q16570 336 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 CLEC12BQ2HXU8 276 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 DEFB110Q30KQ9 67 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 GXYLT1Q4G148 440 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 GLE1Q53GS7 698 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 RNASEH2BQ5TBB1 312 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 TCERG1LQ5VWI1 586 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 SPINK14Q6IE38 97 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 FBXO42Q6P3S6 717 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 TUBA3EQ6PEY2 450 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 WDR53Q7Z5U6 358 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 SLC22A9Q8IVM8 553 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ZNF547Q8IVP9 402 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 DEFB106AQ8N104 65 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 FITM2Q8N6M3 262 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 C3orf56Q8N813 242 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ZNF321PQ8N8H1 164 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 C11orf44Q8N8P7 122 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ZNF397Q8NF99 534 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 ZNF671Q8TAW3 534 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 GPT2Q8TD30 523 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 DNAJA4Q8WW22 397 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 SMPDL3BQ92485 455 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 NPIPB3Q92617 1050 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 KCNJ9Q92806 393 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 PEX13Q92968 403 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 RNASE6Q93091 150 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 RASD2Q96D21 266 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 REPS1Q96D71 796 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 C7orf34Q96L11 122 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 HSFY1Q96LI6 401 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 PCDHB18PQ96TA0 734 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 FAM192AQ9GZU8 254 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 VCX2Q9H322 139 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 KCNK13Q9HB14 408 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 PDFQ9HBH1 243 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 PCDH18Q9HCL0 1135 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 SLC6A13Q9NSD5 602 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 ANKRD10Q9NXR5 420 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 GAR1Q9NY12 217 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 OR6C3Q9NZP0 311 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 NKX1-2Q9UD57 310 aaPredicted RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 MALT1Q9UDY8 824 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 SLC45A2Q9UMX9 530 aa4.24□□□□□ -1.73
XPA-204ENST00000496104 R3HDM2Q9Y2K5 976 aaKnown RBP4.24□□□□□ -1.73
XPA-204ENST00000496104 GRID2IPA4D2P6 1211 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 MFSD2BA6NFX1 497 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TUBAL3A6NHL2 446 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 VSTM2BA6NLU5 285 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 E5RJQ4 531 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TRIM3O75382 744 aaPredicted RBP4.23□□□□□ -1.73
XPA-204ENST00000496104 BMP10O95393 424 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 IGSF6O95976 241 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 HIST1H2ABP04908 130 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 LIPFP07098 398 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TCF4P15884 667 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 ZNF182P17025 639 aaPredicted RBP4.23□□□□□ -1.73
XPA-204ENST00000496104 ZNF24P17028 368 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 ZNF3P17036 446 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 GNAZP19086 355 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TNNI3P19429 210 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 CHRM3P20309 590 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 HIST1H2ADP20671 130 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 PPIFP30405 207 aaKnown RBP4.23□□□□□ -1.73
XPA-204ENST00000496104 HTR7P34969 479 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 RFC3P40938 356 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 ETV4P43268 484 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 GCLMP48507 274 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 BLVRAP53004 296 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TAS2R50P59544 299 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 RHOAP61586 193 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 SIRPAP78324 504 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 PPP1R8Q12972 351 aaKnown RBP4.23□□□□□ -1.73
XPA-204ENST00000496104 VEZF1Q14119 521 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 E2F2Q14209 437 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 PDK3Q15120 406 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TMEM249Q2WGJ8 235 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 RAB6CQ53S08 254 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 PLAC9Q5JTB6 97 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 SH2D4BQ5SQS7 431 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 IRAK1BP1Q5VVH5 260 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 FAM90A2PQ658T7 463 aa4.23□□□□□ -1.73
XPA-204ENST00000496104 TTC19Q6DKK2 380 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms