RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZIK1Q3SY52 487 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 LIN52Q52LA3 116 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 TRMT12Q53H54 448 aaKnown RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 RPS26P11Q5JNZ5 115 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DCST1Q5T197 706 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 FHL5Q5TD97 284 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 HEPHL1Q6MZM0 1159 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 DHRS4L2Q6PKH6 230 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF574Q6ZN55 896 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 USP51Q70EK9 711 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 RRM2BQ7LG56 351 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF786Q8N393 782 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 COX18Q8N8Q8 333 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 TOR1AIP2Q8NFQ8 470 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 TSPAN14Q8NG11 270 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 OR7G1Q8NGA0 311 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 OR10G2Q8NGC3 310 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 OR52P1PQ8NH57 321 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 GPR151Q8TDV0 419 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 OIT3Q8WWZ8 545 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 CTHRC1Q96CG8 243 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 GIMAP5Q96F15 307 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 SLC35A4Q96G79 324 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 C16orf58Q96GQ5 468 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 CCDC74BQ96LY2 380 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 TAAR9Q96RI9 348 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 G6PC3Q9BUM1 346 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 AMBRA1Q9C0C7 1298 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 SERHL2Q9H4I8 314 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 MKKSQ9NPJ1 570 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-214ENST00000495485 FGF21Q9NSA1 209 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 UBAP1Q9NZ09 502 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 MGAT4BQ9UQ53 548 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 LYVE1Q9Y5Y7 322 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 AK5Q9Y6K8 562 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 PTPRQQ9UMZ3 2332 aa9.56□□□□□ -0.88
HDAC3-214ENST00000495485 H3BNH8 94 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DLGAP1O14490 977 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 BCKDKO14874 412 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 UGT2B17O75795 530 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DIRAS1O95057 198 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CHRM4P08173 479 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CCNYL3P0C7X3 344 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 PRKACGP22612 351 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CRYBA2P53672 197 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 IST1P53990 364 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 NR1H2P55055 460 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 NUP107P57740 925 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 PSPHP78330 225 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 MC2RQ01718 297 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 ID2Q02363 134 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CFHR1Q03591 330 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 NPRL3Q12980 569 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DUSP8Q13202 625 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 IQCCQ4KMZ1 466 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 MFSD4BQ5TF39 518 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 MLIPQ5VWP3 458 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 FAM111BQ6SJ93 734 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DEF8Q6ZN54 512 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 QSOX2Q6ZRP7 698 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 TMEM179BQ7Z7N9 219 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 RANBP3LQ86VV4 465 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-214ENST00000495485 TSPYL5Q86VY4 417 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-214ENST00000495485 OFCC1Q8IZS5 231 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 ZNF619Q8N2I2 560 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 SLC16A11Q8NCK7 471 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CDS1Q92903 461 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 PTCHD1Q96NR3 888 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 SLC46A1Q96NT5 459 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 ALPK1Q96QP1 1244 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 SAP130Q9H0E3 1048 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 SLC38A1Q9H2H9 487 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 ANKRD19PQ9H560 264 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 Q9N2J8 555 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 PAPOLBQ9NRJ5 636 aaKnown RBP9.55□□□□□ -0.88
HDAC3-214ENST00000495485 SCN3BQ9NY72 215 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 KCND3Q9UK17 655 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 KLK13Q9UKR3 277 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 RARRES3Q9UL19 164 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 ATXN7L1Q9ULK2 861 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-214ENST00000495485 LOXL2Q9Y4K0 774 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 GMPPBQ9Y5P6 360 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 DSPPQ9NZW4 1301 aa9.55□□□□□ -0.88
HDAC3-214ENST00000495485 LAMA5O15230 3695 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SMIM31A0A1B0GVY4 71 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 TRABD2BA6NFA1 517 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 A6NHS1 94 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 TMEM229AB2RXF0 380 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 ZZEF1O43149 2961 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 HCRTR1O43613 425 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 MPZL2O60487 215 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 DNAJB6O75190 326 aa9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SMNDC1O75940 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 SEC24DO94855 1032 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-214ENST00000495485 NKX2-2O95096 273 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms