RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 HIVEP2P31629 2446 aa13.18□□□□□ -0.3
PCCB-219ENST00000494742 KIAA1324LA8MWY0 1029 aaPredicted RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 SMAD7O15105 426 aaKnown RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 FADS1O60427 444 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 COQ9O75208 318 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 INHBAP08476 426 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 IL3P08700 152 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 HK1P19367 917 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 LOXP28300 417 aaPredicted RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 PTH2RP49190 550 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 RPS3AP61247 264 aaKnown RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 RASA2Q15283 850 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 GUSBP1Q15486 140 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 CYP27C1Q4G0S4 372 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 RAET1LQ5VY80 246 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 ZNF610Q8N9Z0 462 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 IGFBPL1Q8WX77 278 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 KAT2AQ92830 837 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 GFM2Q969S9 779 aaKnown RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 EFHD2Q96C19 240 aaPredicted RBP13.17□□□□□ -0.3
PCCB-219ENST00000494742 HS3ST6Q96QI5 342 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 DSN1Q9H410 356 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 ANKRA2Q9H9E1 313 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 SLC35C2Q9NQQ7 365 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 ZNF225Q9UK10 706 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 PROCRQ9UNN8 238 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 ZNF337Q9Y3M9 751 aa13.17□□□□□ -0.3
PCCB-219ENST00000494742 A0A087WV62 115 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 TRIM64BA6NI03 449 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 A8MT66 165 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 MANBAO00462 879 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 PPP6CO00743 305 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 PCDH7O60245 1069 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 ULK1O75385 1050 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 OR4F21O95013 312 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 TCEA1P23193 301 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 HSD17B3P37058 310 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 CLK3P49761 638 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 SUCLG1P53597 346 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 NR1H2P55055 460 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 CDH13P55290 713 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 SIRPAP78324 504 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 PSG6Q00889 435 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 CLCQ05315 142 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 PON3Q15166 354 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 BEX5Q5H9J7 111 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 GALNT18Q6P9A2 607 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 ZNF572Q7Z3I7 529 aaPredicted RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 METTL25Q8N6Q8 603 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 UHMK1Q8TAS1 419 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 FNDC9Q8TBE3 224 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 EXOSC8Q96B26 276 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 HHATLQ9HCP6 504 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 ZNF701Q9NV72 531 aaPredicted RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 FAM120CQ9NX05 1096 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 STOML1Q9UBI4 398 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
PCCB-219ENST00000494742 AP4B1Q9Y6B7 739 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 HEATR5AQ86XA9 2040 aa13.16□□□□□ -0.3
PCCB-219ENST00000494742 OR2M5A3KFT3 312 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 SCO2O43819 266 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 TSPAN8P19075 237 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 PSMD4P55036 377 aaKnown RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 RAE1P78406 368 aaKnown RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 DECR1Q16698 335 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 SH2D5Q6ZV89 423 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 RPS27LQ71UM5 84 aaKnown RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 OR7G2Q8NG99 324 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 OR4N2Q8NGD1 307 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 C16orf78Q8WTQ4 265 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 TMEM171Q8WVE6 324 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 C11orf24Q96F05 449 aaPredicted RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 ZC3HAV1LQ96H79 300 aaKnown RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 ZNF382Q96SR6 550 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 HBEGFQ99075 208 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 SIRT5Q9NXA8 310 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 PAQR5Q9NXK6 330 aaPredicted RBP13.15□□□□□ -0.3
PCCB-219ENST00000494742 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 MED11Q9P086 117 aa13.15□□□□□ -0.3
PCCB-219ENST00000494742 ZNF180Q9UJW8 692 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms