RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SLC22A18ASQ8N1D0 253 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 MRPL43Q8N983 215 aaKnown RBP3.47□□□□□ -1.85
SMC4-224ENST00000494612 COLGALT1Q8NBJ5 622 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 ATG10Q9H0Y0 220 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 FAM114A2Q9NRY5 505 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 PRODH2Q9UF12 536 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 MLXQ9UH92 298 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 PLEKHA6Q9Y2H5 1048 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 TRPM2O94759 1503 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 FER1L5A0AVI2 2057 aa3.47□□□□□ -1.85
SMC4-224ENST00000494612 UBE4BO95155 1302 aa3.46□□□□□ -1.85
SMC4-224ENST00000494612 CROCC2H7BZ55 1655 aa3.46□□□□□ -1.85
SMC4-224ENST00000494612 ZFYVE9O95405 1425 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 DCCP43146 1447 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 BLMP54132 1417 aaPredicted RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 MYOM3Q5VTT5 1437 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 LGALS8O00214 317 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 ARPC1BO15143 372 aaKnown RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 SRPX2O60687 465 aaPredicted RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 ZNF253O75346 499 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 STK17BO94768 372 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 IGSF6O95976 241 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 PIGRP01833 764 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 FAM200BP0CF97 657 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 GSTT2P0CG29 244 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 GSTT2BP0CG30 244 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 BCL3P20749 454 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 MAGEA4P43358 317 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 POU3F4P49335 361 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 MTTPP55157 894 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 SLC8A3P57103 927 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 DSCR10P59022 87 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 TRA2BP62995 288 aaKnown RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 FUT7Q11130 342 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 SNX1Q13596 522 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 SLC10A1Q14973 349 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 CD226Q15762 336 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 C17orf58Q2M2W7 97 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 SHROOM1Q2M3G4 852 aaPredicted RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 FAM182AQ5T1J6 154 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 P4HA3Q7Z4N8 544 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 GOLGA7Q7Z5G4 137 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 TSEN54Q7Z6J9 526 aaKnown RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 HPS6Q86YV9 775 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 SPAG16Q8N0X2 631 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 ARFGAP2Q8N6H7 521 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 RNF148Q8N7C7 305 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 OR56B1Q8NGI3 324 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 RFESDQ8TAC1 157 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 TBCKQ8TEA7 893 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 MCHR2Q969V1 340 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 MRPL38Q96DV4 380 aaKnown RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 CCDC51Q96ER9 411 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 FAM173AQ9BQD7 235 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 TTYH2Q9BSA4 534 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 RPP25Q9BUL9 199 aaKnown RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 RWDD1Q9H446 243 aaPredicted RBP3.46□□□□□ -1.86
SMC4-224ENST00000494612 TSPY26PQ9H489 355 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 ACTR8Q9H981 624 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 CUTCQ9NTM9 273 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 GPR83Q9NYM4 423 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 PIK3R4Q99570 1358 aa3.46□□□□□ -1.86
SMC4-224ENST00000494612 ATRNO75882 1429 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 NOS1P29475 1434 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PTCH1Q13635 1447 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 LMTK2Q8IWU2 1503 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 TMEM131LA2VDJ0 1609 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 A0A1W2PNU3 283 aaPredicted RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 MFSD2BA6NFX1 497 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 H0YL77 283 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 IMPA2O14732 288 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 B3GALNT1O75752 331 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 AKR7A3O95154 331 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 CA3P07451 260 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PAICSP22234 425 aaKnown RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 HTR5AP47898 357 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 NUMBP49757 651 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 POLR2FP61218 127 aaKnown RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 ZNF33BQ06732 778 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PDIA5Q14554 519 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PARP6Q2NL67 630 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 VWA2Q5GFL6 755 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 MS4A13Q5J8X5 152 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PRR5LQ6MZQ0 368 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 SLC39A4Q6P5W5 647 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 ATRAIDQ6UW56 229 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 Q7L0L9 218 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 DEFB132Q7Z7B7 95 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 CNNM3Q8NE01 707 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 RHOXF1Q8NHV9 184 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 SELENOMQ8WWX9 145 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 CRYGNQ8WXF5 182 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 DLX4Q92988 240 aaPredicted RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 DNAJA3Q96EY1 480 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PIWIL1Q96J94 861 aaKnown RBP3.45□□□□□ -1.86
SMC4-224ENST00000494612 TSPAN18Q96SJ8 248 aa3.45□□□□□ -1.86
SMC4-224ENST00000494612 PSMB7Q99436 277 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms