RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 KRTCAP3Q53RY4 240 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 METTL21CQ5VZV1 264 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SAXO2Q658L1 398 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SLC30A6Q6NXT4 461 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 FIGNL1Q6PIW4 674 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 BLOC1S3Q6QNY0 202 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 ZNF621Q6ZSS3 439 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 MSANTD1Q6ZTZ1 278 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SLC22A16Q86VW1 577 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 COX18Q8N8Q8 333 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 OR5D16Q8NGK9 328 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 RNF138Q8WVD3 245 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 CDS1Q92903 461 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TMEM41AQ96HV5 264 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SLC35G5Q96KT7 338 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 JSRP1Q96MG2 331 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SLC35A5Q9BS91 424 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 OSBPL11Q9BXB4 747 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SERHL2Q9H4I8 314 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 ZNF385DQ9H6B1 395 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 GALNT9Q9HCQ5 603 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SLC52A3Q9NQ40 469 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TMEM45AQ9NWC5 275 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 FBXO34Q9NWN3 711 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 KLRF1Q9NZS2 232 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 FLRT3Q9NZU0 649 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 SEC14L3Q9UDX4 400 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 TRIM33Q9UPN9 1127 aa12.4□□□□□ -0.42
COL1A1-208ENST00000494334 NUP214P35658 2090 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-208ENST00000494334 NBASA2RRP1 2371 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 ACOT7O00154 380 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 RFXANKO14593 260 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 SOX30O94993 753 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 UNC5CO95185 931 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 MAGEA5P43359 124 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 CASP9P55211 416 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 KCNK10P57789 538 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 POU6F2P78424 691 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-208ENST00000494334 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL1A1-208ENST00000494334 EIF2S3LQ2VIR3 472 aaKnown RBP12.39□□□□□ -0.43
COL1A1-208ENST00000494334 AGKQ53H12 422 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 CMPK2Q5EBM0 449 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 CCNJQ5T5M9 372 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 BNC2Q6ZN30 1099 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-208ENST00000494334 GALNT10Q86SR1 603 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 GTF2H4Q92759 462 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 SPDL1Q96EA4 605 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 NEURL3Q96EH8 262 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 ITCHQ96J02 903 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 ZNF597Q96LX8 424 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 BTBD2Q9BX70 525 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 DEFB127Q9H1M4 99 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 ZDHHC11Q9H8X9 412 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 KLHL14Q9P2G3 628 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 RELNP78509 3460 aa12.39□□□□□ -0.43
COL1A1-208ENST00000494334 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 NR5A2O00482 541 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 ADAM10O14672 748 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 GNB5O14775 395 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 FADS1O60427 444 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 UTS2O95399 124 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 ZCCHC18P0CG32 403 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 CAPN3P20807 821 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 PTPN6P29350 595 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 EVI2BP34910 448 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-208ENST00000494334 MASP1P48740 699 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 TRPC1P48995 793 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 SEC24CP53992 1094 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 GAS1P54826 345 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 HSF1Q00613 529 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 ELOAQ14241 798 aaKnown RBP12.38□□□□□ -0.43
COL1A1-208ENST00000494334 TIGD3Q6B0B8 471 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 ZAR1Q86SH2 424 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 GHDCQ8N2G8 530 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 FAM109AQ8N4B1 249 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 WDSUB1Q8N9V3 476 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 GNRHR2Q96P88 292 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 OR51I1Q9H343 314 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 ZNF703Q9H7S9 590 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-208ENST00000494334 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 PCDHGB3Q9Y5G1 929 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
COL1A1-208ENST00000494334 SNPHO15079 494 aa12.37□□□□□ -0.43
COL1A1-208ENST00000494334 ZNHIT1O43257 154 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms