RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TTC24A2A3L6 582 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ARPC1BO15143 372 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 KDELR3O43731 214 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 HOXA1P49639 335 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 F2RL1P55085 397 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NDUFA6P56556 154 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 UPP1Q16831 310 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 CDONQ4KMG0 1287 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ABHD12BQ7Z5M8 362 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 RBMXL3Q8N7X1 1067 aaKnown RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR14L1PQ8NHC6 308 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 SENP5Q96HI0 755 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 OR52A5Q9H2C5 316 aa7.48□□□□□ -1.21
BRCA1-221ENST00000493795 NLE1Q9NVX2 485 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF860A6NHJ4 632 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 A6NIZ1 184 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 DUX1O43812 170 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 BCKDHBP21953 392 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TIA1P31483 386 aaKnown RBP eCLIP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PBX1P40424 430 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 HLCSP50747 726 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 STC1P52823 247 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RAP1BP61224 184 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RAP1AP62834 184 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 FKBP1BP68106 108 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SCAPQ12770 1279 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 GRB7Q14451 532 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PHYHD1Q5SRE7 291 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 OR52E8Q6IFG1 317 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 LCN10Q6JVE6 187 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PLBD1Q6P4A8 553 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 OR4K13Q8NH42 304 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TFAP2BQ92481 460 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZBTB8AQ96BR9 441 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF382Q96SR6 550 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SLC6A14Q9UN76 642 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 A0A1W2PQL4 384 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ANKRD66B4E2M5 251 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 H7BY64 318 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 JRKO75564 520 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 AHSGP02765 367 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CLEC3BP05452 202 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PABPC4LP0CB38 370 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 MPC1LP0DKB6 136 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RNH1P13489 461 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CPT2P23786 658 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 LMO2P25791 158 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CRABP1P29762 137 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RABGGTBP53611 331 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RPS15AP62244 130 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TLE4Q04727 773 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 RCAN2Q14206 197 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ECM1Q16610 540 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 HACD4Q5VWC8 232 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 GTF2H5Q6ZYL4 71 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZFAND4Q86XD8 727 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 OR56B4Q8NH76 319 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZBED3Q96IU2 234 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SLC45A3Q96JT2 553 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PRRC1Q96M27 445 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PRAP1Q96NZ9 151 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 OR10A5Q9H207 317 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 OR10A2Q9H208 303 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 FBRSL1Q9HCM7 1045 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 B4DXG7 233 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 APBB3O95704 486 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 HBE1P02100 147 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 C1GALT1C1LP0DN25 315 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 DRD2P14416 443 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 STT3AP46977 705 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 DAP3P51398 398 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 EFNA3P52797 238 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 MEF2AQ02078 507 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TAP2Q03519 686 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 GPM6BQ13491 265 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 YIF1BQ5BJH7 314 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 C22orf39Q6P5X5 142 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SSX9Q7RTT3 188 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ELP4Q96EB1 424 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TEPSINQ96N21 525 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF317Q96PQ6 595 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PITHD1Q9GZP4 211 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 NSUN3Q9H649 340 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CCM2LQ9NUG4 571 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 MYEF2Q9P2K5 600 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CPNE7Q9UBL6 633 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 FAM198AQ9UFP1 575 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 SLC2A6Q9UGQ3 507 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF891A8MT65 544 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 CXorf49A8MYA2 514 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 F6UZH7 168 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 MSTNO14793 375 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 B4GAT1O43505 415 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 NUDT21O43809 227 aaKnown RBP7.47□□□□□ -1.21
BRCA1-221ENST00000493795 TIMP2P16035 220 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 GABRR1P24046 479 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PKLRP30613 574 aa7.47□□□□□ -1.21
BRCA1-221ENST00000493795 PRPS1P60891 318 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms