RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 DEPPQ9NTK1 212 aa11.13□□□□□ -0.63
RHBDF1-211ENST00000493647 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
RHBDF1-211ENST00000493647 CNOT11Q9UKZ1 510 aaKnown RBP11.13□□□□□ -0.63
RHBDF1-211ENST00000493647 HRH3Q9Y5N1 445 aa11.13□□□□□ -0.63
RHBDF1-211ENST00000493647 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
RHBDF1-211ENST00000493647 OR6C70A6NIJ9 312 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 G3V3Y1 287 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 ASNA1O43681 348 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 NME2P1O60361 137 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 ICOSLGO75144 302 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 TNFRSF21O75509 655 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 SLC25A12O75746 678 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 CBX6O95503 412 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 SP1P08047 785 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 T-ENOLP0DO92 83 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 GPX2P18283 190 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 NME2P22392 152 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 PTGDSP41222 190 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 CRATP43155 626 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 RFX3P48380 749 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 PNLIPRP2P54317 469 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 PSPHP78330 225 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 DECR1Q16698 335 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 ZNF766Q5HY98 468 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 RABL3Q5HYI8 236 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 SLC25A25Q6KCM7 469 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 NANOGP8Q6NSW7 305 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 C8orf82Q6P1X6 216 aaPredicted RBP11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 PTRH1Q86Y79 214 aaKnown RBP11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 DND1Q8IYX4 353 aaKnown RBP11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 ANKFN1Q8N957 763 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 Q8NA96 180 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 GOLM1Q8NBJ4 401 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 PSD4Q8NDX1 1056 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 RNF138Q8WVD3 245 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 SDF2Q99470 211 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 GPATCH1Q9BRR8 931 aaKnown RBP11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 NANOGQ9H9S0 305 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 KLHL1Q9NR64 748 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 LUZP4Q9P127 313 aa11.12□□□□□ -0.63
RHBDF1-211ENST00000493647 ATMQ13315 3056 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 NPIPA5A0A0B4J1W7 369 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 TRAV17A0A0B4J275 112 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 CENPVL1A0A0U1RR11 272 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 PINLYPA6NC86 204 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 DUXAA6NLW8 204 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 NPIPA7E9PJI5 369 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 UTS2O95399 124 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 NPPAP01160 153 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 CHRM4P08173 479 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 NPIPA8P0DM63 369 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 SFTPCP11686 197 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 BMP2P12643 396 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 SLC6A2P23975 617 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 IL12BP29460 328 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 KRT20P35900 424 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 MAGEA8P43361 318 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 TMED10P49755 219 aaKnown RBP11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 NUDT2P50583 147 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 GZMMP51124 257 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 DSTNP60981 165 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 ZNF169Q14929 603 aaPredicted RBP11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 ADRM1Q16186 407 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 SYPL1Q16563 259 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 GRAMD1BQ3KR37 738 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 ARHGAP11BQ3KRB8 267 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 PRAMEF20Q5VT98 475 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 HACD2Q6Y1H2 254 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 TRPM8Q7Z2W7 1104 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 FBXW8Q8N3Y1 598 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 MAL2Q969L2 176 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 ROPN1LQ96C74 230 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 SGCZQ96LD1 299 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 RTN4RQ9BZR6 473 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 ZNF350Q9GZX5 532 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 RAD21L1Q9H4I0 556 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 RUBCNLQ9H714 662 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 EFCAB1Q9HAE3 211 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 TIMMDC1Q9NPL8 285 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 CMTM6Q9NX76 183 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 KCNE5Q9UJ90 142 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 RALYQ9UKM9 306 aaKnown RBP11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 PCDHGA10Q9Y5H3 936 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 SPTA1P02549 2419 aa11.11□□□□□ -0.63
RHBDF1-211ENST00000493647 PRAMEF25A6NGN4 478 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 C17orf51A8MQB3 221 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 NPIPB9F8W1W9 429 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 TP53I11O14683 189 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 FADS1O60427 444 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 FCMRO60667 390 aa11.1□□□□□ -0.63
RHBDF1-211ENST00000493647 ABCB7O75027 752 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms