RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 MC3RP41968 323 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 KIR2DL2P43627 348 aaPredicted RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 EMDP50402 254 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ALDH18A1P54886 795 aaKnown RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 CLDN15P56746 228 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 RPS13P62277 151 aaKnown RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 NKX6-1P78426 367 aaPredicted RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 OCRLQ01968 901 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 CHRNEQ04844 493 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 GALNT1Q10472 559 aaPredicted RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 KEAP1Q14145 624 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 HIST2H2ACQ16777 129 aaPredicted RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 TECRLQ5HYJ1 363 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 HIST2H2AA3Q6FI13 130 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 SLC30A6Q6NXT4 461 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 SLC48A1Q6P1K1 146 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 CLEC9AQ6UXN8 241 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 TMEM64Q6YI46 380 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 CBLL1Q75N03 491 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 CTAGE4Q8IX94 777 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ZBED8Q8IZ13 594 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 METTL4Q8N3J2 472 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 FADS6Q8N9I5 356 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 SIMC1Q8NDZ2 872 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 SPATA3Q8NHX4 192 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 LINC01560Q8TB33 94 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ZNF675Q8TD23 568 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 TRPC4APQ8TEL6 797 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ABTB1Q969K4 478 aaPredicted RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 ERP27Q96DN0 273 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 MAP6Q96JE9 813 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ZNF681Q96N22 645 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 NODALQ96S42 347 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 MTERF1Q99551 399 aaKnown RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 TMEM204Q9BSN7 226 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 NTMT1Q9BV86 223 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 RBM24Q9BX46 236 aaKnown RBP6.33□□□□□ -1.4
CAB39-206ENST00000493540 OSBPL11Q9BXB4 747 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ITPAQ9BY32 194 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 FUT8Q9BYC5 575 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 PIF1Q9H611 641 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 EXO5Q9H790 373 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ZBTB26Q9HCK0 441 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 SAYSD1Q9NPB0 183 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 ERVK13-1Q9NX77 482 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 CD274Q9NZQ7 290 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 PACSIN3Q9UKS6 424 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 WIF1Q9Y5W5 379 aa6.33□□□□□ -1.4
CAB39-206ENST00000493540 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 IQANK1A0A1B0GTG1 560 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 OR6C70A6NIJ9 312 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 GLOD5A6NK44 160 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 EEF1E1-BLOC1S5C9J1V9 151 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 EEF1E1O43324 174 aaKnown RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 TSPAN2O60636 221 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 ICOSLGO75144 302 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 ACSL3O95573 720 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 ALDOAP04075 364 aaKnown RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 CT45A8P0DMV1 189 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CT45A9P0DMV2 189 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 PCNAP12004 261 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 RAC2P15153 192 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 TNNI3P19429 210 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 DRD5P21918 477 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 SRD5A2P31213 254 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 TLX1P31314 330 aaPredicted RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 EEF1A1P68104 462 aaKnown RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 PSPHP78330 225 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 IRF9Q00978 393 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 HMGCS1Q01581 520 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 RCAN2Q14206 197 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 BCL2A1Q16548 175 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 TMEM44Q2T9K0 475 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 KBTBD12Q3ZCT8 623 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CT45A2Q5DJT8 189 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 ZNF628Q5EBL2 1059 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 EEF1A1P5Q5VTE0 462 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 HLA-DQA1Q5Y7H0 255 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CYP2R1Q6VVX0 501 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 DNM1P46Q6ZS02 220 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CXXC5Q7LFL8 322 aaKnown RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 NUP54Q7Z3B4 507 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 GOLGA7Q7Z5G4 137 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 SLC44A1Q8WWI5 657 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 REPS1Q96D71 796 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 STARD4Q96DR4 205 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CNRIP1Q96F85 164 aaPredicted RBP6.32□□□□□ -1.4
CAB39-206ENST00000493540 VSTM2LQ96N03 204 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 TRIB1Q96RU8 372 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 KRT12Q99456 494 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 CENPKQ9BS16 269 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 RNF122Q9H9V4 155 aa6.32□□□□□ -1.4
CAB39-206ENST00000493540 NMRAL1Q9HBL8 299 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms