RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
SSR4-212ENST00000491833 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
SSR4-212ENST00000491833 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
SSR4-212ENST00000491833 PCDHA9Q9Y5H5 950 aa13.03□□□□□ -0.32
SSR4-212ENST00000491833 CUBNO60494 3623 aa13.02□□□□□ -0.32
SSR4-212ENST00000491833 SEC14L5O43304 696 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 TNFRSF21O75509 655 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 CLDN9O95484 217 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.33
SSR4-212ENST00000491833 C2P06681 752 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 FCGR2AP12318 317 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 TBXA2RP21731 343 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 EMDP50402 254 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 B3GALT5-AS1P59052 145 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 PSPHP78330 225 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 CAPRIN1Q14444 709 aaKnown RBP13.02□□□□□ -0.33
SSR4-212ENST00000491833 PON3Q15166 354 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 EXOC3L2Q2M3D2 409 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 ZNF611Q8N823 705 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 OR2W6PQ8NHA6 318 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 KCTD4Q8WVF5 259 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 NXNL1Q96CM4 212 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 BTBD9Q96Q07 612 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 ADOQ96SZ5 270 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 CES1P1Q9UKY3 287 aa13.02□□□□□ -0.33
SSR4-212ENST00000491833 GPR55Q9Y2T6 319 aaPredicted RBP13.02□□□□□ -0.33
SSR4-212ENST00000491833 TNPO3Q9Y5L0 923 aaKnown RBP13.02□□□□□ -0.33
SSR4-212ENST00000491833 CCDC189A1A4V9 331 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 RNF223E7ERA6 249 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 HS3ST1O14792 307 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 ZIC3O60481 467 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 THBDP07204 575 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 PCSK2P16519 638 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 RPS4XP62701 263 aaKnown RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 DUSP2Q05923 314 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 GANABQ14697 944 aaKnown RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 LTB4RQ15722 352 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 ETFDHQ16134 617 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 TRMT12Q53H54 448 aaKnown RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 LARP4Q71RC2 724 aaKnown RBP eCLIP13.01□□□□□ -0.33
SSR4-212ENST00000491833 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 TDRPQ86YL5 185 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 METTL4Q8N3J2 472 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 FNDC9Q8TBE3 224 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 CDK15Q96Q40 435 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 ROPN1BQ9BZX4 212 aaPredicted RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 ROPN1Q9HAT0 212 aaPredicted RBP13.01□□□□□ -0.33
SSR4-212ENST00000491833 PSME2Q9UL46 239 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 ZNF780BQ9Y6R6 833 aa13.01□□□□□ -0.33
SSR4-212ENST00000491833 B4DXG7 233 aa13□□□□□ -0.33
SSR4-212ENST00000491833 H0YC42 278 aa13□□□□□ -0.33
SSR4-212ENST00000491833 H3BML4 177 aa13□□□□□ -0.33
SSR4-212ENST00000491833 LINC01387J3KSC0 135 aa13□□□□□ -0.33
SSR4-212ENST00000491833 KLF4O43474 513 aa13□□□□□ -0.33
SSR4-212ENST00000491833 TLX2O43763 284 aaPredicted RBP13□□□□□ -0.33
SSR4-212ENST00000491833 TSPAN2O60636 221 aa13□□□□□ -0.33
SSR4-212ENST00000491833 BCAS2O75934 225 aaPredicted RBP13□□□□□ -0.33
SSR4-212ENST00000491833 SIX3O95343 332 aaPredicted RBP13□□□□□ -0.33
SSR4-212ENST00000491833 HK1P19367 917 aa13□□□□□ -0.33
SSR4-212ENST00000491833 CCNG1P51959 295 aa13□□□□□ -0.33
SSR4-212ENST00000491833 GAS1P54826 345 aa13□□□□□ -0.33
SSR4-212ENST00000491833 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
SSR4-212ENST00000491833 RPS3AP61247 264 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 IRF9Q00978 393 aa13□□□□□ -0.33
SSR4-212ENST00000491833 IFT88Q13099 833 aa13□□□□□ -0.33
SSR4-212ENST00000491833 GUSBP1Q15486 140 aa13□□□□□ -0.33
SSR4-212ENST00000491833 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
SSR4-212ENST00000491833 METTL2BQ6P1Q9 378 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 COMMD6Q7Z4G1 85 aa13□□□□□ -0.33
SSR4-212ENST00000491833 MILR1Q7Z6M3 343 aa13□□□□□ -0.33
SSR4-212ENST00000491833 CENPLQ8N0S6 344 aaPredicted RBP13□□□□□ -0.33
SSR4-212ENST00000491833 OR52B6Q8NGF0 335 aa13□□□□□ -0.33
SSR4-212ENST00000491833 ZNF675Q8TD23 568 aa13□□□□□ -0.33
SSR4-212ENST00000491833 ACMSDQ8TDX5 336 aa13□□□□□ -0.33
SSR4-212ENST00000491833 TRPC4APQ8TEL6 797 aa13□□□□□ -0.33
SSR4-212ENST00000491833 RNF138Q8WVD3 245 aa13□□□□□ -0.33
SSR4-212ENST00000491833 GFM2Q969S9 779 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 PLPPR2Q96GM1 343 aa13□□□□□ -0.33
SSR4-212ENST00000491833 FAIM2Q9BWQ8 316 aa13□□□□□ -0.33
SSR4-212ENST00000491833 NOL11Q9H8H0 719 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 FANCFQ9NPI8 374 aa13□□□□□ -0.33
SSR4-212ENST00000491833 PFDN4Q9NQP4 134 aa13□□□□□ -0.33
SSR4-212ENST00000491833 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
SSR4-212ENST00000491833 LAMP3Q9UQV4 416 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms