RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	ZKSCAN8	Q15776	578 aa	Predicted RBP	17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	PGGHG	Q32M88	737 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	CT45A2	Q5DJT8	189 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	CYB5R2	Q6BCY4	276 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	EXOC3L1	Q86VI1	746 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	OR10H5	Q8NGA6	315 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	OR5M1	Q8NGP8	315 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	ROBO4	Q8WZ75	1007 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	HSD17B8	Q92506	261 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	CDKL2	Q92772	493 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	NEUROG1	Q92886	237 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	S100PBP	Q96BU1	408 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	FAIM	Q9NVQ4	179 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	RNF11	Q9Y3C5	154 aa		17.21	■□□□□ 0.35
CDK5RAP2-218	ENST00000491334	IGHV4-30-2	A0A087WSY4	118 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SYCE1L	A8MT33	242 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SCO2	O43819	266 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CDC25B	P30305	580 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	EIF1AX	P47813	144 aa	Known RBP	17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SLC6A8	P48029	635 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	RAPH1	Q70E73	1250 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	L3MBTL4	Q8NA19	623 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	OR52B6	Q8NGF0	335 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	KLHL29	Q96CT2	875 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CPNE1	Q99829	537 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	TRAF4	Q9BUZ4	470 aa	Predicted RBP	17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	IPPK	Q9H8X2	491 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SAYSD1	Q9NPB0	183 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	PAQR5	Q9NXK6	330 aa	Predicted RBP	17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	MCTS1	Q9ULC4	181 aa	Known RBP	17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ACOT9	Q9Y305	439 aa		17.2	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334		A0A096LNT2	108 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	UBFD1	O14562	309 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CD8A	P01732	235 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SRD5A1	P18405	259 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ADH6	P28332	368 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	EVI2B	P34910	448 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	NUDT6	P53370	316 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CORO7	P57737	925 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	MRPS35	P82673	323 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ZNF844	Q08AG5	666 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	LIPN	Q5VXI9	398 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CLEC2A	Q6UVW9	174 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	TBC1D1	Q86TI0	1168 aa	Predicted RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	UHMK1	Q8TAS1	419 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	EFHD2	Q96C19	240 aa	Predicted RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ERP27	Q96DN0	273 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ADAD1	Q96M93	576 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	RBBP8	Q99708	897 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	MRPL1	Q9BYD6	325 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	DDX47	Q9H0S4	455 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	FOLH1B	Q9HBA9	442 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ZBTB26	Q9HCK0	441 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CISD1	Q9NZ45	108 aa	Known RBP	17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CAD	P27708	2225 aa		17.19	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	C17orf51	A8MQB3	221 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	EIF1AY	O14602	144 aa	Known RBP	17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	LMX1B	O60663	402 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SYNGR4	O95473	234 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CLDN9	O95484	217 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	LTA4H	P09960	611 aa	Known RBP	17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	MTHFD2	P13995	350 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	PIK3CG	P48736	1102 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GTF2H2	Q13888	395 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	FASTKD3	Q14CZ7	662 aa	Known RBP	17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	LTB4R	Q15722	352 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	PFKFB4	Q16877	469 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ERCC6L	Q2NKX8	1250 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GTF2IRD2B	Q6EKJ0	949 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GTF2H2C	Q6P1K8	395 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GTF2IRD2	Q86UP8	949 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	DUSP19	Q8WTR2	217 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	C1GALT1C1	Q96EU7	318 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	USB1	Q9BQ65	265 aa	Known RBP	17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	TRIM2	Q9C040	744 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	OR10H1	Q9Y4A9	318 aa		17.18	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ELOA3D	A6NLF2	546 aa	Predicted RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CXorf49	A8MYA2	514 aa	Predicted RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GFAP	P14136	432 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	IL32	P24001	234 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GP5	P40197	560 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ARL1	P40616	181 aa	Predicted RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	CLK3	P49761	638 aa	Known RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ALDH18A1	P54886	795 aa	Known RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SRSF2	Q01130	221 aa	Known RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	DUSP2	Q05923	314 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	DLG1	Q12959	904 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ELOA3B	Q3SY89	546 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	FRG2	Q64ET8	278 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	TTC19	Q6DKK2	380 aa	Predicted RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	FIGNL1	Q6PIW4	674 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	GOLGA7	Q7Z5G4	137 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	DTX2	Q86UW9	622 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	SLC44A2	Q8IWA5	706 aa	Predicted RBP	17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	METTL4	Q8N3J2	472 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ELOA3	Q8NG57	546 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ZNF675	Q8TD23	568 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	ATP6V1E2	Q96A05	226 aa		17.17	■□□□□ 0.34
CDK5RAP2-218	ENST00000491334	TM4SF18	Q96CE8	201 aa		17.17	■□□□□ 0.34

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms