RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 TRIM31Q9BZY9 425 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 OR10A4Q9H209 315 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 ZBTB26Q9HCK0 441 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 SAYSD1Q9NPB0 183 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 AHSPQ9NZD4 102 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 MED11Q9P086 117 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 WHRNQ9P202 907 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 CDC42EP3Q9UKI2 254 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 PSME2Q9UL46 239 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 CLEC4AQ9UMR7 237 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 SNX12Q9UMY4 172 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 LIPT1Q9Y234 373 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 RNF115Q9Y4L5 304 aa12.21□□□□□ -0.45
CTDSP1-210ENST00000491064 HAX1O00165 279 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 OR7A17O14581 309 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 GPRIN2O60269 458 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 SS18L1O75177 396 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 BCAS2O75934 225 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 CRABP2P29373 138 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 PSPHP78330 225 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 SGCBQ16585 318 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 CTU2Q2VPK5 515 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 GRTP1Q5TC63 336 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 BEND4Q6ZU67 534 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 GGNQ86UU5 652 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 KLHL7Q8IXQ5 586 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 CENPLQ8N0S6 344 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 OR4N2Q8NGD1 307 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 OR52B6Q8NGF0 335 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 KCTD4Q8WVF5 259 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 GMPPAQ96IJ6 420 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 FANCFQ9NPI8 374 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 GPR52Q9Y2T5 361 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 AP4B1Q9Y6B7 739 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 ZNF780BQ9Y6R6 833 aa12.2□□□□□ -0.46
CTDSP1-210ENST00000491064 PLCE1Q9P212 2302 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 A0A096LNT2 108 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 A0A1W2PP18 115 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CLOCKO15516 846 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 FADS1O60427 444 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 PLGP00747 810 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CTAGE8P0CG41 777 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CTBP2P56545 445 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 MRPS22P82650 360 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 IRF9Q00978 393 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 GALNT1Q10472 559 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 STX5Q13190 355 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 NCMAPQ5T1S8 102 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 ALKBH2Q6NS38 261 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 PPP4R4Q6NUP7 873 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CYS1Q717R9 158 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CTAGE4Q8IX94 777 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CTAGE3PQ8IX95 158 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 CCDC116Q8IYX3 515 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 UHMK1Q8TAS1 419 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 KAT2AQ92830 837 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 ERP27Q96DN0 273 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 C1GALT1C1Q96EU7 318 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 NTMT1Q9BV86 223 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 C19orf24Q9BVV8 132 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 PRRG4Q9BZD6 226 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 RTN4RQ9BZR6 473 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 PTGES2Q9H7Z7 377 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 FOLH1BQ9HBA9 442 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 LRTM1Q9HBL6 345 aa12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 GDF2Q9UK05 429 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 TNPO3Q9Y5L0 923 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-210ENST00000491064 MALRD1Q5VYJ5 2156 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 CD3EP07766 207 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 EIF1AXP47813 144 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 ALDH9A1P49189 494 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 CCNG1P51959 295 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 FAPQ12884 760 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 IFT88Q13099 833 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 PGGHGQ32M88 737 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 GLYR1Q49A26 553 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 TTC19Q6DKK2 380 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 METTL2BQ6P1Q9 378 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 DNAJC14Q6Y2X3 702 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 STK32CQ86UX6 486 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 SLC44A2Q8IWA5 706 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 OR9A2Q8NGT5 310 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 ATP6V1E2Q96A05 226 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 S100PBPQ96BU1 408 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 C11orf24Q96F05 449 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 HS6ST2Q96MM7 605 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 TMEM160Q9NX00 188 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
CTDSP1-210ENST00000491064 UTS2RQ9UKP6 389 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms