RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SMG9Q9H0W8 520 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 KCMF1Q9P0J7 381 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 PRKAG2Q9UGJ0 569 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ZFR2Q9UPR6 939 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 MAB21L2Q9Y586 359 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 EYSQ5T1H1 3165 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 A0A1W2PPL8 197 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 GREM1O60565 184 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 GBX2P52951 348 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 TSTA3Q13630 321 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ZDHHC20Q5W0Z9 365 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 MRGPREQ86SM8 312 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 MS4A15Q8N5U1 240 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SAMD12Q8N8I0 201 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ZBTB44Q8NCP5 570 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 MS4A3Q96HJ5 214 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 ZNF578Q96N58 590 aaPredicted RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SLC38A2Q96QD8 506 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 CDCP1Q9H5V8 836 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 SLAMF7Q9NQ25 335 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 DLL4Q9NR61 685 aa18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 LYARQ9NX58 379 aaKnown RBP18.17■□□□□ 0.5
SNAPC3-206ENST00000490969 HMGN4O00479 90 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 KHNYNO15037 678 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 UBXN7O94888 489 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 ICAM2P13598 275 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 GSTM3P21266 225 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 GABRR2P28476 465 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 ACSL1P33121 698 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 MAP2K6P52564 334 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 DBPQ10586 325 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 IKBIPQ70UQ0 350 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 OR8D4Q8NGM9 314 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 TMEM159Q96B96 161 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SORBS1Q9BX66 1292 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 DENND4CQ5VZ89 1909 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 CASC3O15234 703 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SULT1A3P0DMM9 295 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SULT1A4P0DMN0 295 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 CCR2P41597 374 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 MTNR1BP49286 362 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 TBPL1P62380 186 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 MEF2AQ02078 507 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 CRYZQ08257 329 aaKnown RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 CAMK1Q14012 370 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SLC36A2Q495M3 483 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 LYPD4Q6UWN0 246 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 KIAA0907Q7Z7F0 614 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SCAMP4Q969E2 229 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 ECHDC3Q96DC8 303 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 RADILQ96JH8 1075 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 ABHD1Q96SE0 405 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 TREX2Q9BQ50 279 aaPredicted RBP18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 ZNF649Q9BS31 505 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 BTBD1Q9H0C5 482 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 SUV39H2Q9H5I1 410 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 PTGFRNQ9P2B2 879 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 PPIL1Q9Y3C6 166 aa18.16■□□□□ 0.5
SNAPC3-206ENST00000490969 CCL16O15467 120 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 SLC28A2O43868 658 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 MMP20O60882 483 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 C8AP07357 584 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 GIFP27352 417 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 VSX2P58304 361 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 BHLHB9Q6PI77 547 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 C6orf120Q7Z4R8 191 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 KLBQ86Z14 1044 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 TBC1D19Q8N5T2 526 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 FBXO15Q8NCQ5 510 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 SRFBP1Q8NEF9 429 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 KLHL15Q96M94 604 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 RBCK1Q9BYM8 510 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 CTPS2Q9NRF8 586 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 B4GALT6Q9UBX8 382 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 SCP2D1Q9UJQ7 156 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 RFXAPO00287 272 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 HRO43593 1189 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 B4GALT2O60909 372 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 PPM1BO75688 479 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 RGS9O75916 674 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 GALP22466 123 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 CTNNB1P35222 781 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 MANFP55145 182 aaKnown RBP18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 ST3GAL2Q16842 350 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 CHMP1BQ7LBR1 199 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 OR52N1Q8NH53 320 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 ZC4H2Q9NQZ6 224 aa18.15■□□□□ 0.5
SNAPC3-206ENST00000490969 A0A1W2PRU2 124 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 TSPAN6O43657 245 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 ACSM4P0C7M7 580 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 C1GALT1C1LP0DN25 315 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 NPPBP16860 134 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 NPR2P20594 1047 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 MAP4K2Q12851 820 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 CNTN1Q12860 1018 aa18.14■□□□□ 0.49
SNAPC3-206ENST00000490969 SYPL1Q16563 259 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms