RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FBXL14Q8N1E6 418 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 MYO1HQ8N1T3 1032 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 SVOPLQ8N434 492 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 ANKRD7Q92527 254 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 TANKQ92844 425 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 GFM2Q969S9 779 aaKnown RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 IQCDQ96DY2 449 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 OMA1Q96E52 524 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 VPS39Q96JC1 886 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 RADILQ96JH8 1075 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 SORCS2Q96PQ0 1159 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PELOQ9BRX2 385 aaKnown RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 TBCDQ9BTW9 1192 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 STMN4Q9H169 189 aaPredicted RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 OR10A5Q9H207 317 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 CCDC68Q9H2F9 335 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 C12orf49Q9H741 205 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 RPF2Q9H7B2 306 aaKnown RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 NT5DC2Q9H857 520 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 UNKLQ9H9P5 680 aaKnown RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 CXorf21Q9HAI6 301 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 EHD3Q9NZN3 535 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 XPR1Q9UBH6 696 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 IKZF3Q9UKT9 509 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF490Q9ULM2 529 aaPredicted RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 SOX13Q9UN79 622 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 MAD1L1Q9Y6D9 718 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 COMMD10Q9Y6G5 202 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 SPACA6W5XKT8 324 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 TCRBV7S2A1N4TA0A589 114 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 SYCE3A1L190 88 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 OR2M5A3KFT3 312 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 GPR75O95800 540 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 GUCA1CO95843 209 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 PLGP00747 810 aaPredicted RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 ETS1P14921 441 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 KRT15P19012 456 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 GNAZP19086 355 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 S1PR1P21453 382 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 PCMT1P22061 227 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 GRK2P25098 689 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 APEX1P27695 318 aaKnown RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 HPDP32754 393 aaPredicted RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC1A2P43004 574 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 NPY2RP49146 381 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 RGS4P49798 205 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 HNRNPH2P55795 449 aaKnown RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 DSCR4P56555 118 aaPredicted RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 UBA52P62987 128 aaKnown RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 TNFRSF17Q02223 184 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 TGM3Q08188 693 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 OASLQ15646 514 aaKnown RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 DEPDC1Q5TB30 811 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 RAET1LQ5VY80 246 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 C18orf63Q68DL7 685 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF544Q6NX49 715 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 LUZP1Q86V48 1076 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 EXOC3L1Q86VI1 746 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 CCDC25Q86WR0 208 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 FADS6Q8N9I5 356 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 OR5M1Q8NGP8 315 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 KISS1RQ969F8 398 aaPredicted RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 LINGO1Q96FE5 620 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 ADGRG7Q96K78 797 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 JMJD8Q96S16 334 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 DNAJC7Q99615 494 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 CHP1Q99653 195 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 MS4A8Q9BY19 250 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 ITPAQ9BY32 194 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 ROGDIQ9GZN7 287 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 PITHD1Q9GZP4 211 aaPredicted RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 BFARQ9NZS9 450 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 TRMT6Q9UJA5 497 aaKnown RBP6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 FKBP7Q9Y680 259 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 STAB2Q8WWQ8 2551 aa6.25□□□□□ -1.41
PDLIM1-203ENST00000490391 UQCRHLA0A096LP55 91 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 CTAGE9A4FU28 777 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 ANKDD1BA6NHY2 528 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 OR6C70A6NIJ9 312 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 H3BML4 177 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 EEDO75530 441 aaKnown RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 HAUS5O94927 633 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 IFNB1P01574 187 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 TUBBP07437 444 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC35E2BP0CK96 405 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC35E2P0CK97 266 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 CD22P20273 847 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 GIFP27352 417 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 FABP6P51161 128 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 CHN2P52757 468 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 RPS3AP61247 264 aaKnown RBP6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 PLCXD2Q0VAA5 305 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 ITGADQ13349 1161 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 PPA1Q15181 289 aa6.24□□□□□ -1.41
PDLIM1-203ENST00000490391 SWI5Q1ZZU3 235 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms