RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ITCHQ96J02 903 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 SLC35G5Q96KT7 338 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 PHF12Q96QT6 1004 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 ADOQ96SZ5 270 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 ZNF385DQ9H6B1 395 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 ZNF703Q9H7S9 590 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-212ENST00000489728 SERHLQ9NQF3 203 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 SDHAF3Q9NRP4 125 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 TUBA8Q9NY65 449 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-212ENST00000489728 KLRF1Q9NZS2 232 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 KLHL14Q9P2G3 628 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 DCTN4Q9UJW0 460 aa10.15□□□□□ -0.78
CPSF7-212ENST00000489728 PINLYPA6NC86 204 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CCDC154A6NI56 674 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 SNPHO15079 494 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 SUSD5O60279 629 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 FADS1O60427 444 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 HCN1O60741 890 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 ICOSLGO75144 302 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 KCNK2O95069 426 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CYP4B1P13584 511 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 EVI2BP34910 448 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CHI3L1P36222 383 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-212ENST00000489728 MASP1P48740 699 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 KHKP50053 298 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 TIGD2Q4W5G0 525 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CMPK2Q5EBM0 449 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 RNFT1Q5M7Z0 435 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 AP1ARQ63HQ0 302 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 TIGD3Q6B0B8 471 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 ARHGAP11AQ6P4F7 1023 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 GFRALQ6UXV0 394 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 TMEM251Q8N6I4 163 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CHDHQ8NE62 594 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-212ENST00000489728 OR4N2Q8NGD1 307 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 OR5AK3PQ8NH89 298 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 JADE3Q92613 823 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 EFHD2Q96C19 240 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-212ENST00000489728 CHMP6Q96FZ7 201 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 RMND5BQ96G75 393 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-212ENST00000489728 NODALQ96S42 347 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 SLC35A5Q9BS91 424 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 TMEM120AQ9BXJ8 343 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 HOXD1Q9GZZ0 328 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 ACKR4Q9NPB9 350 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 POLE3Q9NRF9 147 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 EXD2Q9NVH0 621 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 ZNF835Q9Y2P0 537 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 C15orf41Q9Y2V0 281 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 WIF1Q9Y5W5 379 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 GMEB1Q9Y692 573 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
CPSF7-212ENST00000489728 A0A1B0GVC2 190 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 A0A1W2PQD3 144 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 GXYLT2A0PJZ3 443 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 OR14I1A6ND48 311 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 G3V3Y1 287 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 SLC22A2O15244 555 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 NME6O75414 186 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 UNC5CO95185 931 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 UTS2O95399 124 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 KRT75O95678 551 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 STSP08842 583 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ENDOUP21128 410 aaKnown RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 TBXA2RP21731 343 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 MATN1P21941 496 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 GNLYP22749 145 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ADSLP30566 484 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 PTGDSP41222 190 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ARFIP2P53365 341 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 KCNC4Q03721 635 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ATAD3BQ5T9A4 648 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 FNDC7Q5VTL7 733 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 HEPHL1Q6MZM0 1159 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 Q6ZPB1 254 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 WDR53Q7Z5U6 358 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 FUNDC1Q8IVP5 155 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 MISPQ8IVT2 679 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 ZNF527Q8NB42 609 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 OR9I1Q8NGQ6 314 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 OR1J4Q8NGS1 313 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 PIK3R3Q92569 461 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 GTF2H4Q92759 462 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 PMM1Q92871 262 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 CDS1Q92903 461 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 SPDL1Q96EA4 605 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 C16orf58Q96GQ5 468 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 OR7D2Q96RA2 312 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 UBQLN3Q9H347 655 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 UBQLN4Q9NRR5 601 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 THUMPD1Q9NXG2 353 aaKnown RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 CCDC167Q9P0B6 97 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 NPIPA1Q9UND3 350 aa10.13□□□□□ -0.79
CPSF7-212ENST00000489728 MRPS18CQ9Y3D5 142 aaKnown RBP10.13□□□□□ -0.79
CPSF7-212ENST00000489728 NBASA2RRP1 2371 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms