RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GLB1L3Q8NCI6 653 aaPredicted RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 SLC16A11Q8NCK7 471 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 RNF138Q8WVD3 245 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 DTNBP1Q96EV8 351 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 C16orf58Q96GQ5 468 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 MAGEB18Q96M61 343 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 STACQ99469 402 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ZBTB18Q99592 522 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ACTRT3Q9BYD9 372 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 UBQLN3Q9H347 655 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 GALNT9Q9HCQ5 603 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 DUSP22Q9NRW4 184 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ZNF446Q9NWS9 450 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 FAF1Q9UNN5 650 aaPredicted RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 ZGRF1Q86YA3 2104 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 FLNCQ14315 2725 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 GXYLT2A0PJZ3 443 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 NPIPA2E9PIF3 369 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 NPIPA3F8WFD2 350 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 GNB5O14775 395 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 UBDO15205 165 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ZNHIT1O43257 154 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 DIAPH2O60879 1101 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 SCN2BO60939 215 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 TRAPPC6AO75865 159 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 HPNP05981 417 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ACP2P11117 423 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 PTPN6P29350 595 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 LCN1P31025 176 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 UFM1P61960 85 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 LASP1Q14847 261 aaKnown RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 DUSP5Q16690 384 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 EXOSC6Q5RKV6 272 aaKnown RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 ACAD11Q709F0 780 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 FAM110BQ8TC76 370 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 PIK3R3Q92569 461 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 JADE3Q92613 823 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 SARAFQ96BY9 339 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 RMND5BQ96G75 393 aaPredicted RBP15.85■□□□□ 0.13
MDC1-206ENST00000489540 PIGUQ9H490 435 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 SDHAF3Q9NRP4 125 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 ABCG2Q9UNQ0 655 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 MEMO1Q9Y316 297 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 PCDHGB3Q9Y5G1 929 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 WIF1Q9Y5W5 379 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 LIPGQ9Y5X9 500 aa15.85■□□□□ 0.13
MDC1-206ENST00000489540 HIVEP3Q5T1R4 2406 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 C2orf72A6NCS6 295 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 E9PLN8 166 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 FADS1O60427 444 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 RNF224P0DH78 156 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 EVI2BP34910 448 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 RFX3P48380 749 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 NME5P56597 212 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 PHC1P78364 1004 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 LRRC74AQ0VAA2 488 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 TP53BP2Q13625 1128 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 FAM174BQ3ZCQ3 159 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 GXYLT1Q4G148 440 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 PDCD4Q53EL6 469 aaKnown RBP15.84■□□□□ 0.13
MDC1-206ENST00000489540 SPANXN4Q5MJ08 99 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 CDC73Q6P1J9 531 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 CD163Q86VB7 1156 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 PLCZ1Q86YW0 608 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 CLECL1Q8IZS7 167 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 COX18Q8N8Q8 333 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 WDSUB1Q8N9V3 476 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 OR4A15Q8NGL6 344 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 NEIL3Q8TAT5 605 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 ADAMTS15Q8TE58 950 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 TEX37Q96LM6 180 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 OR52B2Q96RD2 323 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 VKORC1Q9BQB6 163 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 YIPF4Q9BSR8 244 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 G6PC3Q9BUM1 346 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 BTBD2Q9BX70 525 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 HHATLQ9HCP6 504 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 GPATCH2Q9NW75 528 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 FAM120CQ9NX05 1096 aaKnown RBP15.84■□□□□ 0.13
MDC1-206ENST00000489540 ACAD8Q9UKU7 415 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 LRRK2Q5S007 2527 aa15.84■□□□□ 0.13
MDC1-206ENST00000489540 ZG16O60844 167 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 SLC22A3O75751 556 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 KCNK2O95069 426 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 UTS2O95399 124 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 SOAT1P35610 550 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 GAS1P54826 345 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 TOMM20Q15388 145 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.83■□□□□ 0.12
MDC1-206ENST00000489540 RPTNQ6XPR3 784 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 FBXO30Q8TB52 745 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 CHMP6Q96FZ7 201 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 CCDC120Q96HB5 630 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 TP63Q9H3D4 680 aaPredicted RBP15.83■□□□□ 0.12
MDC1-206ENST00000489540 SDR39U1Q9NRG7 319 aaPredicted RBP15.83■□□□□ 0.12
MDC1-206ENST00000489540 ZIM2Q9NZV7 527 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 BTNL2Q9UIR0 455 aa15.83■□□□□ 0.12
MDC1-206ENST00000489540 USP9XQ93008 2570 aaPredicted RBP15.82■□□□□ 0.12
MDC1-206ENST00000489540 UQCRHLA0A096LP55 91 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms