RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NPAP1Q9NZP6 1156 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 ASIC3Q9UHC3 531 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 GOLGA8QA0A0J9YX86 632 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 GOLGA8OA6NCC3 632 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 GOLGA8NF8WBI6 632 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 GOLGA8RI6L899 631 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 M0R1B8 84 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 CXCL13O43927 109 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 TGFB1P01137 390 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 GYPCP04921 128 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 IFNGR1P15260 489 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 GIFP27352 417 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 SLC1A2P43004 574 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 HNMTP50135 292 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 CHRNEQ04844 493 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 RASGEF1BQ0VAM2 473 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 PDAP1Q13442 181 aaKnown RBP10.14□□□□□ -0.79
HDAC6-233ENST00000489352 PDSS1Q5T2R2 415 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 LGSNQ5TDP6 509 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 ADNP2Q6IQ32 1131 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 B3GLCTQ6Y288 498 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 C17orf107Q6ZR85 190 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 VN1R5Q7Z5H4 357 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 TDRPQ86YL5 185 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 WDR75Q8IWA0 830 aaKnown RBP10.14□□□□□ -0.79
HDAC6-233ENST00000489352 SLC35B2Q8TB61 432 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 CALML6Q8TD86 181 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 TMBIM1Q969X1 311 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 ADOQ96SZ5 270 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 ITPAQ9BY32 194 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 TSPY26PQ9H489 355 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 NHEJ1Q9H9Q4 299 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-233ENST00000489352 MED11Q9P086 117 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 PAK5Q9P286 719 aa10.14□□□□□ -0.79
HDAC6-233ENST00000489352 LOC105371242A0A075B767 164 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 GOLGA6L10A0A0M3HER8 536 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 WASHC1A8K0Z3 465 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 TIMM23O14925 209 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 PDE5AO76074 875 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 SCELO95171 688 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 IL33O95760 270 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 PNPP00491 289 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 MSMBP08118 114 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 CT62P0C5K7 136 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 NR2F6P10588 404 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 DAOP14920 347 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 BASP1P80723 227 aaKnown RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 LAPTM5Q13571 262 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 RNPS1Q15287 305 aaKnown RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 PPP1R3AQ16821 1122 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 GLYR1Q49A26 553 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 PAGE2BQ5JRK9 111 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 TCHHL1Q5QJ38 904 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 CYP20A1Q6UW02 462 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 Q6ZT83 130 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 NUFIP2Q7Z417 695 aaKnown RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 GALNT10Q86SR1 603 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 GGNQ86UU5 652 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 OR52N5Q8NH56 324 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 RGMAQ96B86 450 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 BRINP2Q9C0B6 783 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 GPRC5BQ9NZH0 403 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 SLC17A6Q9P2U8 582 aa10.13□□□□□ -0.79
HDAC6-233ENST00000489352 ZNF490Q9ULM2 529 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 CORO1CQ9ULV4 474 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-233ENST00000489352 OR5H1A6NKK0 313 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 GOLGA8MH3BSY2 632 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 SCO2O43819 266 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 KERAO60938 352 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 PCNAP12004 261 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 ETS1P14921 441 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 CD22P20273 847 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 DRD5P21918 477 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 GDF5P43026 501 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 NAP1L1P55209 391 aaKnown RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 UBASH3AP57075 661 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 MRPS22P82650 360 aaKnown RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 MAP4K2Q12851 820 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 STX5Q13190 355 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 HBMQ6B0K9 141 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 FRA10AC1Q70Z53 315 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 PRUNE1Q86TP1 453 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 TUSC5Q8IXB3 177 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 OR2M3Q8NG83 312 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 OR51F2Q8NH61 342 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 NANPQ8TBE9 248 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 FAM110BQ8TC76 370 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 ZNF669Q96BR6 464 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 PTCD3Q96EY7 689 aaKnown RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 CMTM7Q96FZ5 175 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 EFCAB11Q9BUY7 163 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 SORBS1Q9BX66 1292 aaKnown RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 MS4A8Q9BY19 250 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 EHD1Q9H4M9 534 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 ZBTB26Q9HCK0 441 aa10.12□□□□□ -0.79
HDAC6-233ENST00000489352 C20orf96Q9NUD7 363 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-233ENST00000489352 FBXO5Q9UKT4 447 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms