RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 S100PBPQ96BU1 408 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 TM4SF18Q96CE8 201 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 NXNL1Q96CM4 212 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 KLHL29Q96CT2 875 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CNRIP1Q96F85 164 aaPredicted RBP14.46□□□□□ -0.09
USP48-210ENST00000489108 GMPPAQ96IJ6 420 aaPredicted RBP14.46□□□□□ -0.09
USP48-210ENST00000489108 ZNF681Q96N22 645 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CDK15Q96Q40 435 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 OSBPL9Q96SU4 736 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CPNE1Q99829 537 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 FOLH1BQ9HBA9 442 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 AHSPQ9NZD4 102 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 AP4B1Q9Y6B7 739 aa14.46□□□□□ -0.09
USP48-210ENST00000489108 CADP27708 2225 aa14.46□□□□□ -0.1
USP48-210ENST00000489108 FAM234BA2RU67 622 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 TP73O15350 636 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 SS18L1O75177 396 aaPredicted RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 LTA4HP09960 611 aaKnown RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 PSMB1P20618 241 aaKnown RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 EVI2BP34910 448 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 EIF1AXP47813 144 aaKnown RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 STX5Q13190 355 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 PAGE2Q7Z2X7 111 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 ATG4DQ86TL0 474 aaPredicted RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 GGNQ86UU5 652 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 METTL4Q8N3J2 472 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 TRPC4APQ8TEL6 797 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 DUSP19Q8WTR2 217 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 CDKL2Q92772 493 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 TNFRSF13CQ96RJ3 184 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 TRAF4Q9BUZ4 470 aaPredicted RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 RTN4RQ9BZR6 473 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 BARX1Q9HBU1 254 aaPredicted RBP14.45□□□□□ -0.1
USP48-210ENST00000489108 SAYSD1Q9NPB0 183 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 TMEM160Q9NX00 188 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 PSME2Q9UL46 239 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 ACOT9Q9Y305 439 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 ZNF780BQ9Y6R6 833 aa14.45□□□□□ -0.1
USP48-210ENST00000489108 SHISA8B8ZZ34 492 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 FADS1O60427 444 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 GUCY1B2O75343 617 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 SEC31AO94979 1220 aaKnown RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 CLDN9O95484 217 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 CTAGE8P0CG41 777 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 GFAPP14136 432 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 THBS2P35442 1172 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 GP5P40197 560 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 ALDH9A1P49189 494 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 RUNX1T1Q06455 604 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 GANABQ14697 944 aaKnown RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 TSC22D1Q15714 1073 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 ZNF628Q5EBL2 1059 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 DNAJC14Q6Y2X3 702 aaPredicted RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 TBC1D1Q86TI0 1168 aaPredicted RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 SLC44A2Q8IWA5 706 aaPredicted RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 CTAGE4Q8IX94 777 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 CCDC116Q8IYX3 515 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 ARIH2OSQ8N7S6 290 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 STEAP2Q8NFT2 490 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 KBTBD8Q8NFY9 601 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 OR10H5Q8NGA6 315 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 OR52B6Q8NGF0 335 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 UHMK1Q8TAS1 419 aaKnown RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 KAT2AQ92830 837 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 VSTM2LQ96N03 204 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 SHARPINQ9H0F6 387 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 ESRP2Q9H6T0 727 aaKnown RBP14.44□□□□□ -0.1
USP48-210ENST00000489108 C12orf49Q9H741 205 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 PTGES2Q9H7Z7 377 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 LRTM1Q9HBL6 345 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 ZBTB26Q9HCK0 441 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 SDHAF3Q9NRP4 125 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 FLRT3Q9NZU0 649 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 LPAR3Q9UBY5 353 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 PPP2R2CQ9Y2T4 447 aa14.44□□□□□ -0.1
USP48-210ENST00000489108 SYCE1LA8MT33 242 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 GOLGA6L6A8MZA4 724 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 OR7A17O14581 309 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 EIF1AYO14602 144 aaKnown RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 BCAS2O75934 225 aaPredicted RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 SIX3O95343 332 aaPredicted RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 PTNP21246 168 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 ARL1P40616 181 aaPredicted RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 ALDH18A1P54886 795 aaKnown RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 CASP9P55211 416 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 MRPS22P82650 360 aaKnown RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 TAB1Q15750 504 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 GLYR1Q49A26 553 aaPredicted RBP14.43□□□□□ -0.1
USP48-210ENST00000489108 SGO1Q5FBB7 561 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 LGSNQ5TDP6 509 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 FRG2Q64ET8 278 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 MFSD12Q6NUT3 480 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 COMMD6Q7Z4G1 85 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 STK32CQ86UX6 486 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 ZNF619Q8N2I2 560 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 ZNF675Q8TD23 568 aa14.43□□□□□ -0.1
USP48-210ENST00000489108 PYROXD1Q8WU10 500 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms