RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GRK2P25098 689 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 MSX1P28360 303 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 GPC1P35052 558 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 MANFP55145 182 aaKnown RBP22.73■■□□□ 1.23
HMGN1-217ENST00000489072 MRPS22P82650 360 aaKnown RBP22.73■■□□□ 1.23
HMGN1-217ENST00000489072 MPP2Q14168 576 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 ZFP28Q8NHY6 868 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 MTERF3Q96E29 417 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 ZBED6CLQ96FA7 236 aaPredicted RBP22.73■■□□□ 1.23
HMGN1-217ENST00000489072 CENPHQ9H3R5 247 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 Q9N2J8 555 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 ACSS1Q9NUB1 689 aaPredicted RBP22.73■■□□□ 1.23
HMGN1-217ENST00000489072 ATP6V1HQ9UI12 483 aa22.73■■□□□ 1.23
HMGN1-217ENST00000489072 CSMD2Q7Z408 3487 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 GXYLT2A0PJZ3 443 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 TMEM114B3SHH9 223 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 FADS1O60427 444 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 EPPINO95925 133 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 DHRS4L1P0CG22 281 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 PRPS2P11908 318 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 MAPK1P28482 360 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 EVI2BP34910 448 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 MAP3K8P41279 467 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 PTGR1Q14914 329 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 ZNHIT3Q15649 155 aaPredicted RBP22.72■■□□□ 1.23
HMGN1-217ENST00000489072 CHI3L2Q15782 390 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 DECR1Q16698 335 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 ATP6AP1LQ52LC2 224 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 PM20D2Q8IYS1 436 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 NAXEQ8NCW5 288 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 OR7A2PQ8NGA2 310 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 OR14L1PQ8NHC6 308 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 PPP1R14CQ8TAE6 165 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 NUDT8Q8WV74 236 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 HOXB13Q92826 284 aaPredicted RBP22.72■■□□□ 1.23
HMGN1-217ENST00000489072 RTN4RQ9BZR6 473 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 NTMQ9P121 344 aa22.72■■□□□ 1.23
HMGN1-217ENST00000489072 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 SCAMP2O15127 329 aaKnown RBP22.71■■□□□ 1.23
HMGN1-217ENST00000489072 BIRC5O15392 142 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 SCO2O43819 266 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 HSPA4LO95757 839 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 IL33O95760 270 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 ACTL6AO96019 429 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 IGKV1D-16P01601 117 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 SERPINE1P05121 402 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 SRD5A2P31213 254 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 GABRA3P34903 492 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 HPCAL1P37235 193 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 LRIG3Q6UXM1 1119 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 R3HCC1LQ7Z5L2 792 aaKnown RBP22.71■■□□□ 1.23
HMGN1-217ENST00000489072 NUP43Q8NFH3 380 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 TNIP2Q8NFZ5 429 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 PIK3R3Q92569 461 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 GIMAP5Q96F15 307 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 C20orf27Q9GZN8 174 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 TAS2R10Q9NYW0 307 aa22.71■■□□□ 1.23
HMGN1-217ENST00000489072 FAM47E-STBD1D6RA91 191 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 TM9SF1O15321 606 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 TUBBP07437 444 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 LAMP1P11279 417 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 CEACAM8P31997 349 aaPredicted RBP22.7■■□□□ 1.22
HMGN1-217ENST00000489072 PRKAG1P54619 331 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 GFRA1P56159 465 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 IL23RQ5VWK5 629 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 LACC1Q8IV20 430 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 TRIM42Q8IWZ5 723 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 ZNF781Q8N8C0 355 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 FNDC5Q8NAU1 212 aa22.7■■□□□ 1.22
HMGN1-217ENST00000489072 SIRT3Q9NTG7 399 aaPredicted RBP22.7■■□□□ 1.22
HMGN1-217ENST00000489072 TTC36A6NLP5 189 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 NKX2-2O95096 273 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 ACP2P11117 423 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 RFX3P48380 749 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 ABCE1P61221 599 aaKnown RBP22.69■■□□□ 1.22
HMGN1-217ENST00000489072 NSUN5P2Q63ZY6 315 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 IFNEQ86WN2 208 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 KRTCAP2Q8N6L1 136 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 FADS6Q8N9I5 356 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 CEP70Q8NHQ1 597 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 FBXO30Q8TB52 745 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 GPR151Q8TDV0 419 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 TUBGCP3Q96CW5 907 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 PGM2Q96G03 612 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 RMND5BQ96G75 393 aaPredicted RBP22.69■■□□□ 1.22
HMGN1-217ENST00000489072 FAM120CQ9NX05 1096 aaKnown RBP22.69■■□□□ 1.22
HMGN1-217ENST00000489072 PPP4R1LQ9P1A2 415 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 ABCG2Q9UNQ0 655 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 ACTL7BQ9Y614 415 aa22.69■■□□□ 1.22
HMGN1-217ENST00000489072 ANKHD1Q8IWZ3 2542 aaKnown RBP22.69■■□□□ 1.22
HMGN1-217ENST00000489072 OTOGQ6ZRI0 2925 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 HSPB2A8KAH6 182 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 EMC8O43402 210 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 ZIC3O60481 467 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 CPN1P15169 458 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 TCEA1P23193 301 aaKnown RBP22.68■■□□□ 1.22
HMGN1-217ENST00000489072 DPP4P27487 766 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 MLC1Q15049 377 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 HSPB2Q16082 182 aa22.68■■□□□ 1.22
HMGN1-217ENST00000489072 SLC25A35Q3KQZ1 300 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms