RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ACSS1Q9NUB1 689 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 NKIRAS1Q9NYS0 192 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 STOML1Q9UBI4 398 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PCDHGB4Q9UN71 923 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 FAF1Q9UNN5 650 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 ABCG2Q9UNQ0 655 aa8.33□□□□□ -1.08
HDAC6-232ENST00000489053 EXO1Q9UQ84 846 aaKnown RBP8.33□□□□□ -1.08
HDAC6-232ENST00000489053 PCNX1Q96RV3 2341 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 DCHS2Q6V1P9 2916 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 A0A1W2PRB8 838 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 NPIPB8E9PQR5 432 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 EMC8O43402 210 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 TYROBPO43914 113 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 NME6O75414 186 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 IFI6P09912 130 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 CT45A8P0DMV1 189 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 CT45A9P0DMV2 189 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 BMP7P18075 431 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 PRPS1L1P21108 318 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 BMP5P22003 454 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 DPP4P27487 766 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 SRD5A2P31213 254 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 UQCRC1P31930 480 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 PRIM2P49643 509 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 DGKQP52824 942 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 EEFSECP57772 596 aaKnown RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ABCE1P61221 599 aaKnown RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 GAB1Q13480 694 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 PGS1Q32NB8 556 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ACSF3Q4G176 576 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 CT45A2Q5DJT8 189 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 IL23RQ5VWK5 629 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 PPP4R4Q6NUP7 873 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 BHLHB9Q6PI77 547 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 Q6ZSR9 355 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 P4HA3Q7Z4N8 544 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 OR4N2Q8NGD1 307 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ZIM3Q96PE6 472 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 TIMP4Q99727 224 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF559Q9BR84 538 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 G6PC3Q9BUM1 346 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 UGT2B28Q9BY64 529 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 UCK2Q9BZX2 261 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 UBQLN3Q9H347 655 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ZCCHC3Q9NUD5 404 aaKnown RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 FAM120CQ9NX05 1096 aaKnown RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 RAB21Q9UL25 225 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 RPH3AQ9Y2J0 694 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-232ENST00000489053 CCL27Q9Y4X3 112 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 FAM215AQ9Y5M1 114 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
HDAC6-232ENST00000489053 A0A0G2JNJ9 132 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 EEF1E1-BLOC1S5C9J1V9 151 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 H3BNH8 94 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 SCDO00767 359 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 EEF1E1O43324 174 aaKnown RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 GMFGO60234 142 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 TSPAN2O60636 221 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 TBX19O60806 448 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 UTS2O95399 124 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 IL33O95760 270 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 CREB1P16220 341 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 HK1P19367 917 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 EFNA1P20827 205 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 ENDOUP21128 410 aaKnown RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 PEX19P40855 299 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 CPA2P48052 419 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 SLC1A6P48664 564 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 RPL14P50914 215 aaKnown RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 DSCR4P56555 118 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 PSG6Q00889 435 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 TLE4Q04727 773 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 CRYZQ08257 329 aaKnown RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 STX3Q13277 289 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 GANABQ14697 944 aaKnown RBP8.31□□□□□ -1.08
HDAC6-232ENST00000489053 PTGR1Q14914 329 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 KIAA0040Q15053 153 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 C6orf136Q5SQH8 315 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 CES4AQ5XG92 561 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 FBXW10Q5XX13 1052 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 ATG16L1Q676U5 607 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 TMEM200AQ86VY9 491 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 GRAMD2AQ8IUY3 354 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 GOLGA6L1Q8N7Z2 621 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 WDSUB1Q8N9V3 476 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 ZNF527Q8NB42 609 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 VPS37AQ8NEZ2 397 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 MGARPQ8TDB4 240 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 MOAP1Q96BY2 351 aa8.31□□□□□ -1.08
HDAC6-232ENST00000489053 PGM2Q96G03 612 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms