RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PLCL2Q9UPR0 1127 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 ERVK-19Q9WJR5 959 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 GPR52Q9Y2T5 361 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 IRAK3Q9Y616 596 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 NCOR1O75376 2440 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 BOD1L1Q8NFC6 3051 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3DA0A087WVF3 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3IA0A087WXS9 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3EA0A087X179 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3KA0A087X1G2 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 C1orf226A1L170 272 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3FA6NER0 549 aaPredicted RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3LB9A6J9 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 KHNYNO15037 678 aaKnown RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 RFPL3O75679 317 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 FURINP09958 794 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3HP0C7X1 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 MPC1LP0DKB6 136 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 GJA4P35212 333 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 DRD3P35462 400 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 NUBP1P53384 320 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TAS2R38P59533 333 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 CDK6Q00534 326 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 FADDQ13158 208 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 QPRTQ15274 297 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SEC23BQ15437 767 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SMAD2Q15796 467 aaKnown RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 HNRNPA1L2Q32P51 320 aaKnown RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 CLEC12AQ5QGZ9 265 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 LIPJQ5W064 366 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3GQ6DHY5 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3CQ6IPX1 549 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 NXPE4Q6UWF7 544 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TBC1D3Q8IZP1 549 aaPredicted RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 RDH10Q8IZV5 341 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SYNPOQ8N3V7 929 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 STPG2Q8N412 459 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 ZFP41Q8N8Y5 198 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 KCT2Q8NC54 265 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 OR4E2Q8NGC2 313 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 OR56A3Q8NH54 315 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 OR10G6Q8NH81 332 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 ENKURQ8TC29 256 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SLC38A4Q969I6 547 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 COQ10AQ96MF6 247 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 GPR137Q96N19 417 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 COL21A1Q96P44 957 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 SLC22A4Q9H015 551 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 CRISPLD2Q9H0B8 497 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 REEP4Q9H6H4 257 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 TRIM45Q9H8W5 580 aaPredicted RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 GALNT9Q9HCQ5 603 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 EXOSC4Q9NPD3 245 aaKnown RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 ZNF275Q9NSD4 429 aaPredicted RBP7.19□□□□□ -1.26
BEST3-205ENST00000488961 ACTR10Q9NZ32 417 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 COPZ2Q9P299 210 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 MGAT4BQ9UQ53 548 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 LIPT1Q9Y234 373 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 PPIL1Q9Y3C6 166 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 PCDHGB1Q9Y5G3 927 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 PCDHGA6Q9Y5G7 932 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 CLCA3PQ9Y6N3 262 aa7.19□□□□□ -1.26
BEST3-205ENST00000488961 NPIPA5A0A0B4J1W7 369 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 PMS2P1A4D2B8 440 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 OR2A25A4D2G3 310 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 POM121BA6NF01 834 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 NPIPA7E9PJI5 369 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 ZNF197O14709 1029 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 FABP7O15540 132 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 CFDP00746 253 aaPredicted RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 PTHP01270 115 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 RAF1P04049 648 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 NPIPA8P0DM63 369 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 GPX2P18283 190 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 HK1P19367 917 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 FUT1P19526 365 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 DNAJA1P31689 397 aaKnown RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 SOX3P41225 446 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 CTSKP43235 329 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 RAB25P57735 213 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 SLC35A2P78381 396 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 MAD2L1BPQ15013 274 aaPredicted RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 MLF2Q15773 248 aaPredicted RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 TIGD3Q6B0B8 471 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 GPR139Q6DWJ6 353 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 ERICH5Q6P6B1 374 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 C5orf46Q6UWT4 87 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 CBLL1Q75N03 491 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 ERN2Q76MJ5 926 aaKnown RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 GHDCQ8N2G8 530 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 C11orf65Q8NCR3 313 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.18□□□□□ -1.26
BEST3-205ENST00000488961 GPR151Q8TDV0 419 aa7.18□□□□□ -1.26
BEST3-205ENST00000488961 ZNF431Q8TF32 576 aaPredicted RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 SMAP2Q8WU79 429 aaPredicted RBP7.18□□□□□ -1.26
BEST3-205ENST00000488961 TMEM19Q96HH6 336 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms