RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 ZNF416Q9BWM5 594 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 RIBC2Q9H4K1 309 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 CALHM2Q9HA72 323 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 TIGARQ9NQ88 270 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 FAM114A2Q9NRY5 505 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 P2RX2Q9UBL9 471 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 ZNF490Q9ULM2 529 aaPredicted RBP4.54□□□□□ -1.68
PHF11-215ENST00000488958 FOXJ3Q9UPW0 622 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 PARD3Q8TEW0 1356 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 NOTCH3Q9UM47 2321 aa4.54□□□□□ -1.68
PHF11-215ENST00000488958 CCT8L1PA6NM43 557 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 C11orf98E9PRG8 122 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.53□□□□□ -1.68
PHF11-215ENST00000488958 SRSF10O75494 262 aaKnown RBP4.53□□□□□ -1.68
PHF11-215ENST00000488958 CA3P07451 260 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 WNT2P09544 360 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 PVRP15151 417 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 PAICSP22234 425 aaKnown RBP4.53□□□□□ -1.68
PHF11-215ENST00000488958 HERVK_113P63132 956 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 ERVK-8P63133 956 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
PHF11-215ENST00000488958 RUNX3Q13761 415 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 USH1GQ495M9 461 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 NADK2Q4G0N4 442 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 RGS9BPQ6ZS82 235 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 ARFGAP2Q8N6H7 521 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 N4BP2L2Q92802 583 aaPredicted RBP4.53□□□□□ -1.68
PHF11-215ENST00000488958 TESK2Q96S53 571 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 RANBP9Q96S59 729 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 ERVK-6Q9BXR3 956 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.53□□□□□ -1.68
PHF11-215ENST00000488958 MBD2Q9UBB5 411 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 PRODH2Q9UF12 536 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 RABL2BQ9UNT1 228 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 POGZQ7Z3K3 1410 aa4.53□□□□□ -1.68
PHF11-215ENST00000488958 ZSCAN5CA6NGD5 496 aaPredicted RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 ANKRD30BLA7E2S9 258 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 NPIPA2E9PIF3 369 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 H0YCG3 227 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 LGALS8O00214 317 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 RIPK2O43353 540 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 OR4F21O95013 312 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 RRASP10301 218 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 THRBP10828 461 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 PRG2P13727 222 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 HNRNPA2B1P22626 353 aaKnown RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 PRPHP41219 470 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 ACTR1AP61163 376 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 EIF2B1Q14232 305 aaKnown RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 SLC10A1Q14973 349 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 ZIC1Q15915 447 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 Q1RN00 199 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 MICAQ29983 383 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 TIMM50Q3ZCQ8 353 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 TMEM41BQ5BJD5 291 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 BEND6Q5SZJ8 279 aaPredicted RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 ATAD3CQ5T2N8 411 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 LHFPL4Q7Z7J7 247 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 OR2T3Q8NH03 318 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 RFESDQ8TAC1 157 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 GDAP2Q9NXN4 497 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 ZNF107Q9UII5 783 aaPredicted RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 DHRS7Q9Y394 339 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
PHF11-215ENST00000488958 KIF3AQ9Y496 699 aa4.52□□□□□ -1.69
PHF11-215ENST00000488958 EFCAB7A8K855 629 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 MPHOSPH10O00566 681 aaKnown RBP4.51□□□□□ -1.69
PHF11-215ENST00000488958 SDHDO14521 159 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 TOXO94900 526 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 MBD3O95983 291 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 THY1P04216 161 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 SLC35G4P0C7Q5 338 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 CALCBP10092 127 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 CLUP10909 449 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 PAX7P23759 505 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 PTPN6P29350 595 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 PTGFRP43088 359 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 POU3F4P49335 361 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 CEP55Q53EZ4 464 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 NCR3LG1Q68D85 454 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 PNCKQ6P2M8 343 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 SLC39A4Q6P5W5 647 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 CASC1Q6TDU7 716 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 PAQR9Q6ZVX9 377 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 GCNT2Q8N0V5 402 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 STKLD1Q8NE28 680 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 OR52M1Q8NGK5 317 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 DNAJA3Q96EY1 480 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 C4orf36Q96KX1 117 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 GPA33Q99795 319 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 ZSCAN5AQ9BUG6 496 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 RMND5AQ9H871 391 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 SLC7A10Q9NS82 523 aa4.51□□□□□ -1.69
PHF11-215ENST00000488958 DCAF13Q9NV06 445 aaKnown RBP4.51□□□□□ -1.69
PHF11-215ENST00000488958 IMPAD1Q9NX62 359 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms