RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 HCFC1P51610 2035 aa10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 INTS1Q8N201 2190 aaKnown RBP10.83□□□□□ -0.68
CCHCR1-215ENST00000488920 GXYLT2A0PJZ3 443 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 CLCA1A8K7I4 914 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 TMEM233B4DJY2 109 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 EEF1E1-BLOC1S5C9J1V9 151 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 NPIPB8E9PQR5 432 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 EEF1E1O43324 174 aaKnown RBP10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 CTAG2O75638 210 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 CHEK2O96017 543 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 TMIGD3P0DMS9 266 aaPredicted RBP10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 SDC1P18827 310 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 GPC1P35052 558 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 OPRM1P35372 400 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 LHX2P50458 406 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 PRKAG1P54619 331 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 TESK1Q15569 626 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 ZNHIT3Q15649 155 aaPredicted RBP10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 FBXL19-AS1Q494R0 122 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 GALNTL6Q49A17 601 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 ZNF385BQ569K4 471 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 ARL13AQ5H913 290 aaPredicted RBP10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 KANK2Q63ZY3 851 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 MARCH3Q86UD3 253 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 TRABD2AQ86V40 505 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 DDIASQ8IXT1 998 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 OR2M3Q8NG83 312 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 DUSP19Q8WTR2 217 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 PPCDCQ96CD2 204 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 APOPT1Q96IL0 206 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 CCT7Q99832 543 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 G6PC3Q9BUM1 346 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 REEP4Q9H6H4 257 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 Q9N2J8 555 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 EQTNQ9NQ60 294 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 MKS1Q9NXB0 559 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 MED11Q9P086 117 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 SH3BP4Q9P0V3 963 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 MRPS18CQ9Y3D5 142 aaKnown RBP10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 TRAF6Q9Y4K3 522 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
CCHCR1-215ENST00000488920 LSM1O15116 133 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 PDPK1O15530 556 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 NPHS1O60500 1241 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 RCBTB2O95199 551 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 IL33O95760 270 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 IGKV1D-16P01601 117 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 FGF4P08620 206 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 NUDT17P0C025 328 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 PRPS2P11908 318 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 NEFHP12036 1026 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 HK1P19367 917 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 EFNA1P20827 205 aaPredicted RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 CHMP24386 653 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 MANFP55145 182 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 DSCR4P56555 118 aaPredicted RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 CLDN18P56856 261 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 B3GALT5-AS1P59052 145 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 RPL38P63173 70 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 UGT3A2Q3SY77 523 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 ZCCHC23Q6ZST2 131 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 ADGRE4PQ86SQ3 457 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 EXOC3L1Q86VI1 746 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 FADS6Q8N9I5 356 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 OR5M1Q8NGP8 315 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 AGR3Q8TD06 166 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 TCP10LQ8TDR4 215 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 GPR151Q8TDV0 419 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 FAM222BQ8WU58 562 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 PIK3R3Q92569 461 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 WNT2BQ93097 391 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 INTS12Q96CB8 462 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 DTNBP1Q96EV8 351 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 FCRL1Q96LA6 429 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 TM9SF2Q99805 663 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 GPATCH1Q9BRR8 931 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 LMF2Q9BU23 707 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 POLDIP3Q9BY77 421 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 SDHAF3Q9NRP4 125 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 GIMAP2Q9UG22 337 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 LGALS13Q9UHV8 139 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 MRTO4Q9UKD2 239 aaKnown RBP10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 CELSR1Q9NYQ6 3014 aa10.81□□□□□ -0.68
CCHCR1-215ENST00000488920 TEP1Q99973 2627 aaKnown RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 TUBAL3A6NHL2 446 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 PIP5K1BO14986 540 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 GMFGO60234 142 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 UTS2O95399 124 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 TGM6O95932 706 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 IL18BPO95998 194 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 FREM3P0C091 2139 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 BCKDHAP12694 445 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 CREB1P16220 341 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 ZNF708P17019 499 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 DNAJA1P31689 397 aaKnown RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 PEX19P40855 299 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 CLK3P49761 638 aaKnown RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 BCL2A1Q16548 175 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 FLYWCH1Q4VC44 716 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms