RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ADAMTS15Q8TE58 950 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 HOXB13Q92826 284 aaPredicted RBP11.8□□□□□ -0.52
PHF1-210ENST00000488767 NODALQ96S42 347 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 ACTRT3Q9BYD9 372 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 TBL1XR1Q9BZK7 514 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 ACKR4Q9NPB9 350 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 DUSP22Q9NRW4 184 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 FAM120CQ9NX05 1096 aaKnown RBP11.8□□□□□ -0.52
PHF1-210ENST00000488767 TINAGQ9UJW2 476 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 ACAD8Q9UKU7 415 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 C15orf41Q9Y2V0 281 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 WIF1Q9Y5W5 379 aa11.8□□□□□ -0.52
PHF1-210ENST00000488767 POLEQ07864 2286 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 C15orf38-AP3S2A0A0A6YYH1 394 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 DUXAA6NLW8 204 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 FIGNL2A6NMB9 653 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 NPIPA2E9PIF3 369 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 NPIPA3F8WFD2 350 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 AQP7O14520 342 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 GNB5O14775 395 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 SNPHO15079 494 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 ANKRD28O15084 1053 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 SLC22A3O75751 556 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 CBR3O75828 277 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 NKX2-2O95096 273 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 LDLRP01130 860 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 IL6P05231 212 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 LCN1P31025 176 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 MRPL19P49406 292 aaKnown RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 HBA1P69905 142 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 POU6F2P78424 691 aaPredicted RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 C3AR1Q16581 482 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 FAM174BQ3ZCQ3 159 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 SLC9B1Q4ZJI4 515 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 PDCD4Q53EL6 469 aaKnown RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 TRILQ7L0X0 811 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 WDR53Q7Z5U6 358 aaPredicted RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 CD163Q86VB7 1156 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 MIER2Q8N344 545 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 OR4K17Q8NGC6 315 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 FBXO30Q8TB52 745 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 GNRHR2Q96P88 292 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 STACQ99469 402 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 SIKE1Q9BRV8 207 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 TP63Q9H3D4 680 aaPredicted RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 CXorf36Q9H7Y0 433 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 PROK2Q9HC23 129 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 TCF7L2Q9NQB0 619 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 GIN1Q9NXP7 522 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
PHF1-210ENST00000488767 USP9XQ93008 2570 aaPredicted RBP11.79□□□□□ -0.52
PHF1-210ENST00000488767 A0A1B0GVC2 190 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 E9PLN8 166 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SCDO00767 359 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SCO2O43819 266 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 UTS2O95399 124 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
PHF1-210ENST00000488767 AGR2O95994 175 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 ALDOCP09972 364 aaKnown RBP11.78□□□□□ -0.52
PHF1-210ENST00000488767 RFPL3SP0C7P2 107 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 CYP4B1P13584 511 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 UQCRC2P22695 453 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
PHF1-210ENST00000488767 ANXA11P50995 505 aaKnown RBP11.78□□□□□ -0.52
PHF1-210ENST00000488767 UFM1P61960 85 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SRSF1Q07955 248 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■□□□□ 8.1
PHF1-210ENST00000488767 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.524e-19■■■■■ 37.3
PHF1-210ENST00000488767 SPANXN4Q5MJ08 99 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 TMEM211Q6ICI0 200 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 CDC73Q6P1J9 531 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 ANKRD46Q86W74 232 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 PLCZ1Q86YW0 608 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 ZNF527Q8NB42 609 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SLC16A11Q8NCK7 471 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 OR5AK3PQ8NH89 298 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 OR14L1PQ8NHC6 308 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 NEIL3Q8TAT5 605 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SLC35G5Q96KT7 338 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 PANX1Q96RD7 426 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 VKORC1Q9BQB6 163 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 BTBD2Q9BX70 525 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 PIGUQ9H490 435 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 RMND5AQ9H871 391 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SLCO1B3Q9NPD5 702 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 SIRT3Q9NTG7 399 aaPredicted RBP11.78□□□□□ -0.52
PHF1-210ENST00000488767 EXD2Q9NVH0 621 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 TMEM45AQ9NWC5 275 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 DKKL1Q9UK85 242 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
PHF1-210ENST00000488767 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms