RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 Q0VFX4 171 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 ELAVL1Q15717 326 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 SHQ1Q6PI26 577 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 SUN3Q8TAQ9 357 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 DOK4Q8TEW6 326 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 PPCDCQ96CD2 204 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 MTERF3Q96E29 417 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 RBM18Q96H35 190 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 MUS81Q96NY9 551 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 DGAT2Q96PD7 388 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 LPAR4Q99677 370 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 SMURF2Q9HAU4 748 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 IL1RAPQ9NPH3 570 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 SLAMF7Q9NQ25 335 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 ATAD3AQ9NVI7 634 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 FAM118AQ9NWS6 357 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 RSL24D1Q9UHA3 163 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 ZNF780BQ9Y6R6 833 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 DOCK10Q96BY6 2186 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 SYNDIG1LA6NDD5 238 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 SAGE2PA6NJ88 616 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 H3BSA7 217 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 PORP16435 677 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 CSNK2A2P19784 350 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 PCGF2P35227 344 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 ESRRGP62508 458 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 BIKQ13323 160 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 ZIK1Q3SY52 487 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 ZBED5Q49AG3 693 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 LRRC23Q53EV4 343 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 TMEM179BQ7Z7N9 219 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 ZNF555Q8NEP9 628 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 NFAM1Q8NET5 270 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 CIDECQ96AQ7 238 aaPredicted RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 DDX18Q9NVP1 670 aaKnown RBP17.98■□□□□ 0.47
CCM2-216ENST00000488727 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 KCNMB2Q9Y691 235 aa17.98■□□□□ 0.47
CCM2-216ENST00000488727 MYO1GB0I1T2 1018 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 C17orf105B2RV13 164 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 ZNF701M0R085 212 aaPredicted RBP17.97■□□□□ 0.47
CCM2-216ENST00000488727 OR10H2O60403 315 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 C1QCP02747 245 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 ATP1B1P05026 303 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 CELA2AP08217 269 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 GAB1Q13480 694 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 RBM48Q5RL73 367 aaKnown RBP17.97■□□□□ 0.47
CCM2-216ENST00000488727 C19orf48Q6RUI8 117 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 GPR141Q7Z602 305 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 THAP5Q7Z6K1 395 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 CCDC116Q8IYX3 515 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 C8orf59Q8N0T1 100 aaPredicted RBP17.97■□□□□ 0.47
CCM2-216ENST00000488727 LRRC25Q8N386 305 aaPredicted RBP17.97■□□□□ 0.47
CCM2-216ENST00000488727 TMIGD2Q96BF3 282 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 FER1L6-AS2Q96M78 137 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 ING2Q9H160 280 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 PRORYQ9H606 182 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 ENTPD4Q9Y227 616 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 CLCA3PQ9Y6N3 262 aa17.97■□□□□ 0.47
CCM2-216ENST00000488727 HRKO00198 91 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 DPM1O60762 260 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 E2F6O75461 281 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 ZNF682O95780 498 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 TNNI3P19429 210 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 TTKP33981 857 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 SOX18P35713 384 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 GPR143P51810 404 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 SLC26A5P58743 744 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 LTB4RQ15722 352 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 OR2T5Q6IEZ7 315 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 PIWIL3Q7Z3Z3 882 aaKnown RBP17.96■□□□□ 0.47
CCM2-216ENST00000488727 C7orf57Q8NEG2 295 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 OR4A15Q8NGL6 344 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 OR2T29Q8NH02 315 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 MPP4Q96JB8 637 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 PELOQ9BRX2 385 aaKnown RBP17.96■□□□□ 0.47
CCM2-216ENST00000488727 AMBRA1Q9C0C7 1298 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 CXorf21Q9HAI6 301 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 GIMAP4Q9NUV9 329 aa17.96■□□□□ 0.47
CCM2-216ENST00000488727 DNAJB5O75953 348 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 DDAH2O95865 285 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 FABP3P05413 133 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 CT62P0C5K7 136 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 ITGAMP11215 1152 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 RAD23AP54725 363 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 IL18R1Q13478 541 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 RGNQ15493 299 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 BTBD16Q32M84 506 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 PLAG1Q6DJT9 500 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 SAMD14Q8IZD0 417 aaPredicted RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 HS3ST5Q8IZT8 346 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 ZNF321PQ8N8H1 164 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 APCDD1LQ8NCL9 501 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 OR14A16Q8NHC5 309 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 HDAC2Q92769 488 aaKnown RBP17.95■□□□□ 0.46
CCM2-216ENST00000488727 RIT1Q92963 219 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 NRBF2Q96F24 287 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 BBS4Q96RK4 519 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 VNN3Q9NY84 501 aa17.95■□□□□ 0.46
CCM2-216ENST00000488727 TMEFF2Q9UIK5 374 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms