RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 OR5M10Q6IEU7 315 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 SEM1Q6ZVN7 128 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 FNDC5Q8NAU1 212 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 ACBD4Q8NC06 268 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 FBXO30Q8TB52 745 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 ABTB1Q969K4 478 aaPredicted RBP16.15■□□□□ 0.18
ITGB1-215ENST00000488494 MS4A4EQ96PG1 132 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 SPOCK3Q9BQ16 436 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 TAS2R10Q9NYW0 307 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 CSMD1Q96PZ7 3565 aa16.15■□□□□ 0.18
ITGB1-215ENST00000488494 OTOGQ6ZRI0 2925 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 AHRRA9YTQ3 701 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 B4DXG7 233 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 TM9SF1O15321 606 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ITM2AO43736 263 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 PRPS2P11908 318 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 PRKAG1P54619 331 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 STX5Q13190 355 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 PDCD2Q16342 344 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-215ENST00000488494 C6orf136Q5SQH8 315 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 R3HCC1LQ7Z5L2 792 aaKnown RBP16.14■□□□□ 0.17
ITGB1-215ENST00000488494 IFNEQ86WN2 208 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 LACC1Q8IV20 430 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 LIX1LQ8IVB5 337 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ZNF295-AS1Q8N0V1 137 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 OR7A2PQ8NGA2 310 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 TUBGCP3Q96CW5 907 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 MTERF3Q96E29 417 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 RMND5BQ96G75 393 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-215ENST00000488494 WDYHV1Q96HA8 205 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ENKD1Q9H0I2 346 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ZNF395Q9H8N7 513 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ACSS1Q9NUB1 689 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-215ENST00000488494 PPP4R1LQ9P1A2 415 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 ABCG2Q9UNQ0 655 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 PKDREJQ9NTG1 2253 aa16.14■□□□□ 0.17
ITGB1-215ENST00000488494 GXYLT2A0PJZ3 443 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 BIRC5O15392 142 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 IL33O95760 270 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 ACTL6AO96019 429 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 TUBBP07437 444 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 IGFBP2P18065 325 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 SRD5A2P31213 254 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 GABRA3P34903 492 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 RPL3P39023 403 aaKnown RBP16.13■□□□□ 0.17
ITGB1-215ENST00000488494 SLC25A35Q3KQZ1 300 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 LRIG3Q6UXM1 1119 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 ZNF781Q8N8C0 355 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 NAXEQ8NCW5 288 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 NUP43Q8NFH3 380 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 TNIP2Q8NFZ5 429 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 OR4K17Q8NGC6 315 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 GPR151Q8TDV0 419 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 PIK3R3Q92569 461 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 DTNBP1Q96EV8 351 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 PPP1R36Q96LQ0 422 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 TRIB1Q96RU8 372 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 TREX2Q9BQ50 279 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-215ENST00000488494 FAM120CQ9NX05 1096 aaKnown RBP16.13■□□□□ 0.17
ITGB1-215ENST00000488494 ATP6V1HQ9UI12 483 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 MRTO4Q9UKD2 239 aaKnown RBP16.13■□□□□ 0.17
ITGB1-215ENST00000488494 PDZD2O15018 2839 aa16.13■□□□□ 0.17
ITGB1-215ENST00000488494 CSMD2Q7Z408 3487 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 HSPB2A8KAH6 182 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 H0Y3Z8 333 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 FADS1O60427 444 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 ZWINTO95229 277 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 KCNH1O95259 989 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 UTS2O95399 124 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 EPPINO95925 133 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 IGKV1D-16P01601 117 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 MYZAPP0CAP1 466 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 DHRS4L1P0CG22 281 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 DDX5P17844 614 aaKnown RBP16.12■□□□□ 0.17
ITGB1-215ENST00000488494 SSTR2P30874 369 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 PSMD4P55036 377 aaKnown RBP16.12■□□□□ 0.17
ITGB1-215ENST00000488494 GFRA1P56159 465 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 ABCE1P61221 599 aaKnown RBP16.12■□□□□ 0.17
ITGB1-215ENST00000488494 MPP2Q14168 576 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 HSPB2Q16082 182 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 VPS26BQ4G0F5 336 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 TNFAIP8L3Q5GJ75 292 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 IL23RQ5VWK5 629 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 NSUN5P2Q63ZY6 315 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 MFSD12Q6NUT3 480 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 GALNT10Q86SR1 603 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 KRTCAP2Q8N6L1 136 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 CDRT4Q8N9R6 151 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 SLC9A6Q92581 669 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 OTUB1Q96FW1 271 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-215ENST00000488494 PGM2Q96G03 612 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 SFXN2Q96NB2 322 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 RTN4RQ9BZR6 473 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 C3orf14Q9HBI5 128 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 KCNK9Q9NPC2 374 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 NTMQ9P121 344 aa16.12■□□□□ 0.17
ITGB1-215ENST00000488494 RPH3AQ9Y2J0 694 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-215ENST00000488494 ACTL7BQ9Y614 415 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms