RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 POU6F2P78424 691 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 MXRA7P84157 204 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 TUBA3CQ13748 450 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 EFR3AQ14156 821 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 CAPRIN1Q14444 709 aaKnown RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 DUSP5Q16690 384 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 GTDC1Q4AE62 458 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 RUNDC3AQ59EK9 446 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.89
SKA1-204ENST00000488454 FAM91A1Q658Y4 838 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 TNFAIP8L2Q6P589 184 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 TUBA3EQ6PEY2 450 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 IGFL2Q6UWQ7 119 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 RTL4Q6ZR62 310 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 TRPM8Q7Z2W7 1104 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 NUP54Q7Z3B4 507 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 PRR22Q8IZ63 422 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 CYP4Z2PQ8N1L4 340 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 FAM13CQ8NE31 585 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 OR5D16Q8NGK9 328 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 OR5M3Q8NGP4 307 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 MIPOL1Q8TD10 442 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 PIK3R3Q92569 461 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 CDS1Q92903 461 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 TMCO6Q96DC7 493 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 SPACA9Q96E40 222 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 OMA1Q96E52 524 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 OTUB1Q96FW1 271 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 WBP1Q96G27 269 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 RMND5BQ96G75 393 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 SLC35A4Q96G79 324 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 AURKBQ96GD4 344 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 ANKRD27Q96NW4 1050 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 COL21A1Q96P44 957 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 HOPXQ9BPY8 73 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 G6PC3Q9BUM1 346 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 BTBD2Q9BX70 525 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 OR51I1Q9H343 314 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 ZNF71Q9NQZ8 489 aaPredicted RBP9.49□□□□□ -0.89
SKA1-204ENST00000488454 SLC6A13Q9NSD5 602 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 VAPAQ9P0L0 249 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 TP53TG5Q9Y2B4 290 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 AP3M1Q9Y2T2 418 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 PCSK5Q92824 1860 aa9.49□□□□□ -0.89
SKA1-204ENST00000488454 GXYLT2A0PJZ3 443 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 OR6C70A6NIJ9 312 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 CCT8L1PA6NM43 557 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 PPM1BO75688 479 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 UNC5CO95185 931 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 NADKO95544 446 aaPredicted RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 P04436 131 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 NR2F1P10589 423 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 PTPN6P29350 595 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 MAP3K8P41279 467 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 MAN2A2P49641 1150 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 CLK3P49761 638 aaKnown RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 ST13P50502 369 aaKnown RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 PNLIPRP2P54317 469 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 DSTNP60981 165 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 HPCAP84074 193 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 FADDQ13158 208 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 GNA13Q14344 377 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 RGNQ15493 299 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 OR1C1Q15619 314 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 ZNF791Q3KP31 576 aaPredicted RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 COX20Q5RI15 118 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 ZNF468Q5VIY5 522 aaPredicted RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 SPINK14Q6IE38 97 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 FIGNL1Q6PIW4 674 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 IGFL3Q6UXB1 125 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 NPSR1Q6W5P4 371 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 BCORP1Q8N888 145 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 TEX19Q8NA77 164 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 OR4N2Q8NGD1 307 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 DIO2Q92813 273 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 HOXB13Q92826 284 aaPredicted RBP9.48□□□□□ -0.89
SKA1-204ENST00000488454 RAB8BQ92930 207 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 C5orf34Q96MH7 638 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 ADOQ96SZ5 270 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 ECSITQ9BQ95 431 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 SLC25A18Q9H1K4 315 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 ARL8BQ9NVJ2 186 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 SLC25A37Q9NYZ2 338 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 LIPT1Q9Y234 373 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 L3MBTL1Q9Y468 752 aa9.48□□□□□ -0.89
SKA1-204ENST00000488454 PTPRQQ9UMZ3 2332 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 TRBV5-3A0A0A0MS03 114 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 C15orf38-AP3S2A0A0A6YYH1 394 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 TRAV17A0A0B4J275 112 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 HMGN4O00479 90 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 ZNF354AO60765 605 aaPredicted RBP9.47□□□□□ -0.89
SKA1-204ENST00000488454 KCNK2O95069 426 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 IL33O95760 270 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 ETFAP13804 333 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 HPGDP15428 266 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 GPX2P18283 190 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 CALB2P22676 271 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 LCN1P31025 176 aa9.47□□□□□ -0.89
SKA1-204ENST00000488454 CPA2P48052 419 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms