RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 OR5M3Q8NGP4 307 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 OR2T4Q8NH00 348 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 WDR48Q8TAF3 677 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 APOBEC4Q8WW27 367 aaKnown RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 PTP4A1Q93096 173 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 TMED9Q9BVK6 235 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 REEP4Q9H6H4 257 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 TBC1D17Q9HA65 648 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 COPZ2Q9P299 210 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 GOLGA4Q13439 2230 aaKnown RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 LOC105369274A0A096LPK9 316 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 PRODHO43272 600 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 PI15O43692 258 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 LEFTY1O75610 366 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 APOL3O95236 402 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 SRPRAP08240 638 aaKnown RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 SULT1A3P0DMM9 295 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 SULT1A4P0DMN0 295 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 MYOGP15173 224 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 C4BPBP20851 252 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 RECQLP46063 649 aaPredicted RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 RFX3P48380 749 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 RPL6Q02878 288 aaKnown RBP13.36□□□□□ -0.27
RER1-207ENST00000488353 C2orf80Q0P641 193 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 CAMK1Q14012 370 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 GINS1Q14691 196 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 ZNF77Q15935 545 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 TMEM240Q5SV17 173 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 REEP3Q6NUK4 255 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 TCTN3Q6NUS6 607 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 OR4N4Q8N0Y3 316 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 REG4Q9BYZ8 158 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 LDAHQ9H6V9 325 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 HCN3Q9P1Z3 774 aa13.36□□□□□ -0.27
RER1-207ENST00000488353 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
RER1-207ENST00000488353 MFSD2BA6NFX1 497 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 LIMS3P0CW19 117 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 LIMS4P0CW20 117 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 TFPIP10646 304 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 VIPR1P32241 457 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 SOAT1P35610 550 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 PITPNBP48739 271 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 EFNB1P98172 346 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 TMEM220Q6QAJ8 160 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 COMMD6Q7Z4G1 85 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 ADAMTS14Q8WXS8 1223 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 CEBPBP17676 345 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 F8A1P23610 371 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
RER1-207ENST00000488353 LCN1P31025 176 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 MTNR1AP48039 350 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 RAG2P55895 527 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 SMIM11AP58511 58 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 PRSS53Q2L4Q9 553 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 CLVS2Q5SYC1 327 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 IDNKQ5T6J7 187 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 ACSM5Q6NUN0 579 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 SLCO4C1Q6ZQN7 724 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 MMP21Q8N119 569 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 ZNF485Q8NCK3 441 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 OR8D4Q8NGM9 314 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 FGF11Q92914 225 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 OSGEPL1Q9H4B0 414 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 MED9Q9NWA0 146 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 CBLCQ9ULV8 474 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 ZNF175Q9Y473 711 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
RER1-207ENST00000488353 NPC1O15118 1278 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
RER1-207ENST00000488353 GPR37L1O60883 481 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 SEMA7AO75326 666 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 CELP19835 753 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 ACSL1P33121 698 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 LBX1P52954 281 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 VSX2P58304 361 aaPredicted RBP13.34□□□□□ -0.27
RER1-207ENST00000488353 TAP2Q03519 686 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 CRYZQ08257 329 aaKnown RBP13.34□□□□□ -0.27
RER1-207ENST00000488353 TMEM115Q12893 351 aaPredicted RBP13.34□□□□□ -0.27
RER1-207ENST00000488353 SLBPQ14493 270 aaKnown RBP eCLIP13.34□□□□□ -0.27
RER1-207ENST00000488353 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 OVCH2Q7RTZ1 564 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 OAFQ86UD1 273 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 TTLQ8NG68 377 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 OR56A3Q8NH54 315 aa13.34□□□□□ -0.27
RER1-207ENST00000488353 HSD17B8Q92506 261 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms