RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 KCNMB4Q86W47 210 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 MINDY2Q8NBR6 621 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 CCDC148Q8NFR7 591 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 SPPL2AQ8TCT8 520 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
SRRM1-215ENST00000488317 AGAP4Q96P64 663 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 TSGA13Q96PP4 275 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 GSDMAQ96QA5 445 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 ACCSQ96QU6 501 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 CCSER1Q9C0I3 900 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 UPF3AQ9H1J1 476 aaKnown RBP3.99□□□□□ -1.77
SRRM1-215ENST00000488317 COQ10BQ9H8M1 238 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 ECT2Q9H8V3 914 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 WDR41Q9HAD4 459 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 IL1RAPQ9NPH3 570 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 AATFQ9NY61 560 aaKnown RBP eCLIP3.99□□□□□ -1.77
SRRM1-215ENST00000488317 TMEM181Q9P2C4 612 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 EIF3KQ9UBQ5 218 aaKnown RBP3.99□□□□□ -1.77
SRRM1-215ENST00000488317 MIOXQ9UGB7 285 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 TMCC3Q9ULS5 477 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 TNRC6CQ9HCJ0 1690 aaKnown RBP3.99□□□□□ -1.77
SRRM1-215ENST00000488317 RTL9Q8NET4 1388 aa3.99□□□□□ -1.77
SRRM1-215ENST00000488317 UBN2Q6ZU65 1347 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 DCCP43146 1447 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TNS3Q68CZ2 1445 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 BAZ2BQ9UIF8 2168 aaKnown RBP3.98□□□□□ -1.77
SRRM1-215ENST00000488317 A0A087WZY1 265 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 FAM230AA0A1W2PPH8 454 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 ANKRD30BLA7E2S9 258 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.98□□□□□ -1.77
SRRM1-215ENST00000488317 F8WDY8 70 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 FBP2O00757 339 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GPAA1O43292 621 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 ZNF749O43361 778 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TSPAN2O60636 221 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TOM1L1O75674 476 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 NXPH4O95158 308 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 MMP1P03956 469 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 ZSCAN5DPP0CG00 497 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GP9P14770 177 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 CYP2F1P24903 491 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TRPC1P48995 793 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GTF2A1P52655 376 aaPredicted RBP3.98□□□□□ -1.77
SRRM1-215ENST00000488317 NDST1P52848 882 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TMEM50BP56557 158 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 PDZK1IP1Q13113 114 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 HKDC1Q2TB90 917 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GALNT17Q6IS24 598 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 DPY19L2P2Q6ZN68 376 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GOLGA7Q7Z5G4 137 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 AMZ2Q86W34 360 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 GPBP1Q86WP2 473 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 C10orf67Q8IYJ2 551 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 TTC5Q8N0Z6 440 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 PYROXD2Q8N2H3 581 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 CERS5Q8N5B7 392 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 NCLNQ969V3 563 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 NDUFAF3Q9BU61 184 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 RBM4Q9BWF3 364 aaKnown RBP3.98□□□□□ -1.77
SRRM1-215ENST00000488317 HAUS4Q9H6D7 363 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 SP140LQ9H930 580 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 SLC35D1Q9NTN3 355 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 THEGQ9P2T0 379 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 NIP7Q9Y221 180 aaKnown RBP eCLIP3.98□□□□□ -1.77
SRRM1-215ENST00000488317 SLC9A8Q9Y2E8 581 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 ATP6V0A2Q9Y487 856 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 FKBP7Q9Y680 259 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 U3KQV3 271 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 CACNA1SQ13698 1873 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 CDK5RAP2Q96SN8 1893 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 C1orf167Q5SNV9 1468 aa3.98□□□□□ -1.77
SRRM1-215ENST00000488317 AFF2P51816 1311 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CDHR2Q9BYE9 1310 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 NAV1Q8NEY1 1877 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 IGHV3-20A0A0C4DH32 117 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 MPTX1A8MV57 137 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 VGLL3A8MV65 326 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 GOLGA8KD6RF30 607 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 K7ERI5 159 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 TRAFD1O14545 582 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LINC01565O15544 149 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CLDN3O15551 220 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 EDIL3O43854 480 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 RANBP6O60518 1105 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 VPS26AO75436 327 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 DEXIO95424 95 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 IGKV3-20P01619 116 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 GYPCP04921 128 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CYP11B1P15538 503 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 SELEP16581 610 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 PAICSP22234 425 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 MDH1P40925 334 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 RAG2P55895 527 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 VSNL1P62760 191 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 NOP14P78316 857 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 HSF2Q03933 536 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 RFTN1Q14699 578 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 FASTKD3Q14CZ7 662 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms