RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 Q8NA96 180 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 PNPT1Q8TCS8 783 aaKnown RBP14.46□□□□□ -0.09
C9orf3-219ENST00000488186 SPPL2AQ8TCT8 520 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 JSRP1Q96MG2 331 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-219ENST00000488186 PHF12Q96QT6 1004 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 DOHHQ9BU89 302 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 TRIM4Q9C037 500 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 TPT1P8Q9HAU6 139 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 ARMCX1Q9P291 453 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-219ENST00000488186 PCDHB14Q9Y5E9 798 aa14.46□□□□□ -0.09
C9orf3-219ENST00000488186 TSPAN2O60636 221 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 KCNK2O95069 426 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 AK1P00568 194 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 OR12D1P0DN82 309 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 CYP4B1P13584 511 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 PPIBP23284 216 aaKnown RBP14.45□□□□□ -0.1
C9orf3-219ENST00000488186 MAP3K8P41279 467 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 MASP1P48740 699 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 MLLT10P55197 1068 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 NFYCQ13952 458 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 PIGWQ7Z7B1 504 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 GALNT10Q86SR1 603 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 PACS2Q86VP3 889 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 POGLUT1Q8NBL1 392 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 CPT1CQ8TCG5 803 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 ZFP90Q8TF47 636 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 HOXB13Q92826 284 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-219ENST00000488186 HGDQ93099 445 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 PAIP1Q9H074 479 aaKnown RBP14.45□□□□□ -0.1
C9orf3-219ENST00000488186 IL1RL2Q9HB29 575 aa14.45□□□□□ -0.1
C9orf3-219ENST00000488186 CHCHD2Q9Y6H1 151 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-219ENST00000488186 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.45□□□□□ -0.1
C9orf3-219ENST00000488186 ASPDHA6ND91 283 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 TMEM247A6NEH6 219 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 PRAMEF25A6NGN4 478 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 BBIP1A8MTZ0 92 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 EVPLLA8MZ36 301 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 CLIC1O00299 241 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SLC28A2O43868 658 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SHOX2O60902 331 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-219ENST00000488186 DCTN3O75935 186 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SNX4O95219 450 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 UTS2O95399 124 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 FAM107AO95990 144 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 CASP3P42574 277 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 DNASE1L1P49184 302 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 MAN2A2P49641 1150 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 HPCAP84074 193 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 ALDH6A1Q02252 535 aaKnown RBP14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SNTA1Q13424 505 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 GTDC1Q4AE62 458 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 DCST2Q5T1A1 773 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 CCNJQ5T5M9 372 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SLC30A6Q6NXT4 461 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 DHDDSQ86SQ9 333 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SNX32Q86XE0 403 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 PCYOX1LQ8NBM8 494 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 OR2M7Q8NG81 312 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 MIPOL1Q8TD10 442 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 GRHL3Q8TE85 626 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 RAB8BQ92930 207 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SNRNP40Q96DI7 357 aaKnown RBP14.44□□□□□ -0.1
C9orf3-219ENST00000488186 NODALQ96S42 347 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SH2D2AQ9NP31 389 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 SLC52A3Q9NQ40 469 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 CNOT11Q9UKZ1 510 aaKnown RBP14.44□□□□□ -0.1
C9orf3-219ENST00000488186 BOKQ9UMX3 212 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-219ENST00000488186 KCNE3Q9Y6H6 103 aa14.44□□□□□ -0.1
C9orf3-219ENST00000488186 ANKRD33BA6NCL7 494 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 ACOT7O00154 380 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 ASNA1O43681 348 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 CD1EP15812 388 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 LCN1P31025 176 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 RFC3P40938 356 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 MAGEA8P43361 318 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 PMP22Q01453 160 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 GPAT3Q53EU6 434 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 EXOSC6Q5RKV6 272 aaKnown RBP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 LRIF1Q5T3J3 769 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 BICRALQ6AI39 1079 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 DESI1Q6ICB0 168 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 ANKS4BQ8N8V4 417 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 CCDC197Q8NCU1 140 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 OR52N2Q8NGI0 321 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 RP9Q8TA86 221 aaKnown RBP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 AURKBQ96GD4 344 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 BARD1Q99728 777 aaKnown RBP14.43□□□□□ -0.1
C9orf3-219ENST00000488186 OSBPL11Q9BXB4 747 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 ANGPTL4Q9BY76 406 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 TBL1XR1Q9BZK7 514 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 HOXD1Q9GZZ0 328 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 SDHAF3Q9NRP4 125 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 SLC6A13Q9NSD5 602 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 DEPPQ9NTK1 212 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 OLAHQ9NV23 265 aa14.43□□□□□ -0.1
C9orf3-219ENST00000488186 GID8Q9NWU2 228 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms