RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 HSPA4LO95757 839 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 IL33O95760 270 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 SERPINE1P05121 402 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 DHRS4L1P0CG22 281 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 GRK2P25098 689 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 MAPK1P28482 360 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 SRD5A2P31213 254 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 GABRA3P34903 492 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 EVI2BP34910 448 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 GCKP35557 465 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 TIMP3P35625 211 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 MAP3K8P41279 467 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 PRKAG1P54619 331 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 WNT3P56703 355 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 PTGR1Q14914 329 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 SF3B4Q15427 424 aaKnown RBP eCLIP10.41□□□□□ -0.746e-14■■■■■ 67.7
SPEN-205ENST00000487496 CHI3L2Q15782 390 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 HSPB2Q16082 182 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 ATP6AP1LQ52LC2 224 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 LACC1Q8IV20 430 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 TRIM42Q8IWZ5 723 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 NUP43Q8NFH3 380 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 TNIP2Q8NFZ5 429 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 OR14L1PQ8NHC6 308 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 CEP70Q8NHQ1 597 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 PIK3R3Q92569 461 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 HOXB13Q92826 284 aaPredicted RBP10.41□□□□□ -0.74
SPEN-205ENST00000487496 GIMAP5Q96F15 307 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 C14orf79Q96F83 325 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 ZIM3Q96PE6 472 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 C1orf50Q9BV19 199 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 CENPHQ9H3R5 247 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 ZNF395Q9H8N7 513 aaPredicted RBP10.41□□□□□ -0.74
SPEN-205ENST00000487496 EQTNQ9NQ60 294 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 TAS2R10Q9NYW0 307 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 FLRT3Q9NZU0 649 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 NTMQ9P121 344 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 ATP6V1HQ9UI12 483 aa10.41□□□□□ -0.74
SPEN-205ENST00000487496 MRTO4Q9UKD2 239 aaKnown RBP10.41□□□□□ -0.74
SPEN-205ENST00000487496 MRPS18CQ9Y3D5 142 aaKnown RBP10.41□□□□□ -0.74
SPEN-205ENST00000487496 GXYLT2A0PJZ3 443 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 CD8B2A6NJW9 211 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 SCAMP2O15127 329 aaKnown RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 TM9SF1O15321 606 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 BIRC5O15392 142 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 SCO2O43819 266 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 ZIC3O60481 467 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 NKX2-2O95096 273 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 LAMP1P11279 417 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 CPN1P15169 458 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 DDX5P17844 614 aaKnown RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 EFNA1P20827 205 aaPredicted RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 DPP4P27487 766 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 SSTR2P30874 369 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 CEACAM8P31997 349 aaPredicted RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 HPCAL1P37235 193 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 RPL3P39023 403 aaKnown RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 RFX3P48380 749 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 PSMD4P55036 377 aaKnown RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 GFRA1P56159 465 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 MPP2Q14168 576 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 MLC1Q15049 377 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 SLC25A35Q3KQZ1 300 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 IL23RQ5VWK5 629 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 NSUN5P2Q63ZY6 315 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 IFNEQ86WN2 208 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 DMRTC2Q8IXT2 367 aaPredicted RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 ZNF781Q8N8C0 355 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 FADS6Q8N9I5 356 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 FNDC5Q8NAU1 212 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 NAXEQ8NCW5 288 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 OR7A2PQ8NGA2 310 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 GPR151Q8TDV0 419 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 NUDT8Q8WV74 236 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 TUBGCP3Q96CW5 907 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 RTN4RQ9BZR6 473 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 SDHAF3Q9NRP4 125 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 FAM120CQ9NX05 1096 aaKnown RBP10.4□□□□□ -0.74
SPEN-205ENST00000487496 PPP4R1LQ9P1A2 415 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 ABCG2Q9UNQ0 655 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.74
SPEN-205ENST00000487496 MED12Q93074 2177 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 CSMD1Q96PZ7 3565 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 EMC8O43402 210 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 KCNH1O95259 989 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 UTS2O95399 124 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 IGKV1D-16P01601 117 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 STARP49675 285 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 DSCR4P56555 118 aaPredicted RBP10.39□□□□□ -0.75
SPEN-205ENST00000487496 ABCE1P61221 599 aaKnown RBP10.39□□□□□ -0.75
SPEN-205ENST00000487496 EMX2Q04743 252 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 VPS26BQ4G0F5 336 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 CPTPQ5TA50 214 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 MFSD12Q6NUT3 480 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 AAGABQ6PD74 315 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 POMZP3Q6PJE2 187 aa10.39□□□□□ -0.75
SPEN-205ENST00000487496 ENPP6Q6UWR7 440 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms