RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 DSN1Q9H410 356 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 C3orf14Q9HBI5 128 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 CCM2LQ9NUG4 571 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-215ENST00000487401 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 ST6GALNAC2Q9UJ37 374 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
SREBF1-215ENST00000487401 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
SREBF1-215ENST00000487401 FAM221AA4D161 298 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 UPK1AO00322 258 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 CHEK2O96017 543 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 PEPDP12955 493 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 GABRA3P34903 492 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 GPC1P35052 558 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 RFX3P48380 749 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 GAS1P54826 345 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 DIO3P55073 304 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 EEFSECP57772 596 aaKnown RBP11.28□□□□□ -0.6
SREBF1-215ENST00000487401 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 STX5Q13190 355 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 CLEC6AQ6EIG7 209 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 ADGRE4PQ86SQ3 457 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 LUZP2Q86TE4 346 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 C10orf107Q8IVU9 208 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 C4orf33Q8N1A6 199 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 OR2L13Q8N349 312 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 MEIOBQ8N635 442 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 CHDHQ8NE62 594 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-215ENST00000487401 RNF138Q8WVD3 245 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 FOXC2Q99958 501 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
SREBF1-215ENST00000487401 PIGMQ9H3S5 423 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 PTGES2Q9H7Z7 377 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 C1orf109Q9NX04 203 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 MED11Q9P086 117 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
SREBF1-215ENST00000487401 TTC36A6NLP5 189 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CASKO14936 926 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 AZIN1O14977 448 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 PDPK1O15530 556 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 FADS1O60427 444 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 KCNH1O95259 989 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 IL33O95760 270 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 PRPS2P11908 318 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 ZNF708P17019 499 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CLDN18P56856 261 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 OR2A2Q6IF42 318 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 PLXDC2Q6UX71 529 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 GCNT2Q8N0V5 402 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 FADS6Q8N9I5 356 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 OR2M3Q8NG83 312 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CEP70Q8NHQ1 597 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 EPS8L3Q8TE67 593 aaKnown RBP11.27□□□□□ -0.61
SREBF1-215ENST00000487401 DUSP19Q8WTR2 217 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.61
SREBF1-215ENST00000487401 EGLN2Q96KS0 407 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.61
SREBF1-215ENST00000487401 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 G6PC3Q9BUM1 346 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 TBL1XR1Q9BZK7 514 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 LIME1Q9H400 295 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 EQTNQ9NQ60 294 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 FAM120CQ9NX05 1096 aaKnown RBP11.27□□□□□ -0.61
SREBF1-215ENST00000487401 SH3BP4Q9P0V3 963 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CLCF1Q9UBD9 225 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 FIS1Q9Y3D6 152 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.61
SREBF1-215ENST00000487401 CELSR1Q9NYQ6 3014 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 TLDC2A0PJX2 215 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 SLC22A20A6NK97 555 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 C17orf51A8MQB3 221 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 LINC01387J3KSC0 135 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 CTIFO43310 598 aaKnown RBP11.26□□□□□ -0.61
SREBF1-215ENST00000487401 AKAP10O43572 662 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 TRIM13O60858 407 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 UTS2O95399 124 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 PSMG1O95456 288 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 TGM6O95932 706 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 IFI6P09912 130 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 NEFHP12036 1026 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 CD99P14209 185 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 PRPH2P23942 346 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 PRKAG1P54619 331 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 MANFP55145 182 aaKnown RBP11.26□□□□□ -0.61
SREBF1-215ENST00000487401 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 SLC18A2Q05940 514 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 HSPB3Q12988 150 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
SREBF1-215ENST00000487401 KIAA0040Q15053 153 aa11.26□□□□□ -0.61
SREBF1-215ENST00000487401 ANKRD26P1Q6NSI1 321 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms