RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 LMNTD2Q8IXW0 634 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF397Q8NF99 534 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 NPRL2Q8WTW4 380 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 TRIM51Q9BSJ1 452 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 CHCHD5Q9BSY4 110 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 CCDC28BQ9BUN5 200 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 RWDD1Q9H446 243 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 LIN28AQ9H9Z2 209 aaKnown RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 Q9HAA7 133 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 NRN1Q9NPD7 142 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 TAS2R16Q9NYV7 291 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 BCAP29Q9UHQ4 241 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 MGAT4AQ9UM21 535 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 FBXO7Q9Y3I1 522 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 COL6A3P12111 3177 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 PSME4Q14997 1843 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 ABCC4O15439 1325 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 SORBS2O94875 1100 aaKnown RBP4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 CCDC159P0C7I6 412 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 GP9P14770 177 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 FOSL2P15408 326 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 SLC1A4P43007 532 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 SGSHP51688 502 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 RAG2P55895 527 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 DPYSQ14117 519 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 ZSWIM7Q19AV6 140 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 LUZP1Q86V48 1076 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 CATSPER3Q86XQ3 398 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 PYROXD2Q8N2H3 581 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 SAMD12Q8N8I0 201 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 CCDC51Q96ER9 411 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF597Q96LX8 424 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 HSD17B14Q9BPX1 270 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 CABLES2Q9BTV7 478 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 RAB11FIP5Q9BXF6 653 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 SP140LQ9H930 580 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 CTSZQ9UBR2 303 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 RARRES3Q9UL19 164 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 AURKCQ9UQB9 309 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 FER1L5A0AVI2 2057 aa4.04□□□□□ -1.76
PRPF38A-203ENST00000487160 IGHV3OR16-10A0A075B7F0 116 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 A0A0A6YYD4 124 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 TEX48A0A1B0GUV7 120 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 K7EPI3 171 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 CFLARO15519 480 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 BUB1O43683 1085 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 STK17BO94768 372 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 OAS1P00973 400 aaKnown RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 PTMAP06454 111 aaKnown RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 GSTA1P08263 222 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 IL4RP24394 825 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 MTTPP55157 894 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 NAAAQ02083 359 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 RFTN1Q14699 578 aaPredicted RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 SHROOM1Q2M3G4 852 aaPredicted RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF699Q32M78 642 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 AGAP7PQ5VUJ5 663 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 FAAP20Q6NZ36 180 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 GOLGA7Q7Z5G4 137 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 GPBP1Q86WP2 473 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 NBPF5PQ86XG9 351 aaPredicted RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 TEX9Q8N6V9 391 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 ZBTB44Q8NCP5 570 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 OR52B4Q8NGK2 314 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 WDR36Q8NI36 951 aaKnown RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 SELENOMQ8WWX9 145 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 NCLNQ969V3 563 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 C16orf45Q96MC5 204 aaPredicted RBP4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 CPXM1Q96SM3 734 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 VGLL1Q99990 258 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 CCSER1Q9C0I3 900 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 VPS33BQ9H267 617 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 TUBB1Q9H4B7 451 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 ECT2Q9H8V3 914 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 ACTR8Q9H981 624 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 IL1RL2Q9HB29 575 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 YAE1D1Q9NRH1 226 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 STARD5Q9NSY2 213 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 SCN9AQ15858 1988 aa4.03□□□□□ -1.76
PRPF38A-203ENST00000487160 DUOX1Q9NRD9 1551 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 DLG5Q8TDM6 1919 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 A0A0J9YWU9 116 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 BCLAF3A2AJT9 711 aaKnown RBP4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 RNF212BA8MTL3 300 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 E9PQ18 207 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 LGALS8O00214 317 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 CYB561D2O14569 222 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 SMPD2O60906 423 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 IGHDP01880 384 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 ZNF883P0CG24 379 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 DESP17661 470 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 CALML3P27482 149 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 HPDP32754 393 aaPredicted RBP4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 ETV5P41161 510 aa4.02□□□□□ -1.77
PRPF38A-203ENST00000487160 PAX8Q06710 450 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms