RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 FADS1O60427 444 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 IL33O95760 270 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 IL18BPO95998 194 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 CHRNGP07510 517 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 LINC00032P0C843 101 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 CHMP24386 653 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 PSMD4P55036 377 aaKnown RBP17.33■□□□□ 0.36
CLIP2-206ENST00000487091 UGT3A2Q3SY77 523 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ARL13AQ5H913 290 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-206ENST00000487091 OR5M10Q6IEU7 315 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 WDR93Q6P2C0 686 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ZNF551Q7Z340 670 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ADGRE4PQ86SQ3 457 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ZFP28Q8NHY6 868 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 TCP10LQ8TDR4 215 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 AENQ8WTP8 325 aaKnown RBP17.33■□□□□ 0.36
CLIP2-206ENST00000487091 GFM2Q969S9 779 aaKnown RBP17.33■□□□□ 0.36
CLIP2-206ENST00000487091 PPCDCQ96CD2 204 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ZFP3Q96NJ6 502 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 TUBA1CQ9BQE3 449 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 C3orf14Q9HBI5 128 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 SDHAF3Q9NRP4 125 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 SLC17A7Q9P2U7 560 aa17.33■□□□□ 0.36
CLIP2-206ENST00000487091 ZIC3O60481 467 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 PRPS2P11908 318 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 DPP4P27487 766 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 OPRM1P35372 400 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 SERPINB5P36952 375 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 FRKP42685 505 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 ASMTP46597 345 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 LHX2P50458 406 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 DSCR4P56555 118 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 RPL38P63173 70 aaKnown RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 PDE7AQ13946 482 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 BCL2A1Q16548 175 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 FADS6Q8N9I5 356 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 OR4K17Q8NGC6 315 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 CEP70Q8NHQ1 597 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 TWIST2Q8WVJ9 160 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 HOXB13Q92826 284 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 CAVIN3Q969G5 261 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 MTERF3Q96E29 417 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 ZBED6CLQ96FA7 236 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 SFXN2Q96NB2 322 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 TSSK3Q96PN8 268 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 MECRQ9BV79 373 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 ACSS1Q9NUB1 689 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 FAM120CQ9NX05 1096 aaKnown RBP17.32■□□□□ 0.36
CLIP2-206ENST00000487091 NTMQ9P121 344 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 PPP4R1LQ9P1A2 415 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 DKKL1Q9UK85 242 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 MPDZO75970 2070 aa17.32■□□□□ 0.36
CLIP2-206ENST00000487091 B4DXG7 233 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 H0Y3Z8 333 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 AKAP10O43572 662 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 SPAG7O75391 227 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 ZWINTO95229 277 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 DDX5P17844 614 aaKnown RBP17.31■□□□□ 0.36
CLIP2-206ENST00000487091 UQCRC1P31930 480 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 GABRA3P34903 492 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 GPC1P35052 558 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 MAP3K8P41279 467 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 KIR2DL3P43628 341 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 STARP49675 285 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
CLIP2-206ENST00000487091 HSPB3Q12988 150 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 ZNF385BQ569K4 471 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 ANKRD26P1Q6NSI1 321 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 TMEM200AQ86VY9 491 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 OR2M3Q8NG83 312 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 WNT2BQ93097 391 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 CIDECQ96AQ7 238 aaPredicted RBP17.31■□□□□ 0.36
CLIP2-206ENST00000487091 TM9SF2Q99805 663 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 TMEM109Q9BVC6 243 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 SH3BP4Q9P0V3 963 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 ITGB1BP2Q9UKP3 347 aa17.31■□□□□ 0.36
CLIP2-206ENST00000487091 MED12LQ86YW9 2145 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 PCNX3Q9H6A9 2034 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 TMEM233B4DJY2 109 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 SCO2O43819 266 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 RCBTB2O95199 551 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 TMIGD3P0DMS9 266 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-206ENST00000487091 BCKDHAP12694 445 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 ZNF708P17019 499 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 DGKQP52824 942 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 MANFP55145 182 aaKnown RBP17.3■□□□□ 0.36
CLIP2-206ENST00000487091 SRYQ05066 204 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 GANABQ14697 944 aaKnown RBP17.3■□□□□ 0.36
CLIP2-206ENST00000487091 GALNTL6Q49A17 601 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 VPS26BQ4G0F5 336 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 LRIG3Q6UXM1 1119 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 R3HCC1LQ7Z5L2 792 aaKnown RBP17.3■□□□□ 0.36
CLIP2-206ENST00000487091 CDRT4Q8N9R6 151 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 PPP3R2Q96LZ3 170 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 G6PC3Q9BUM1 346 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 DSN1Q9H410 356 aa17.3■□□□□ 0.36
CLIP2-206ENST00000487091 JKAMPQ9P055 326 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms