RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TRIM58Q8NG06 486 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 OR52B6Q8NGF0 335 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 NEUROG1Q92886 237 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 LRRC39Q96DD0 335 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 RADILQ96JH8 1075 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 BTBD9Q96Q07 612 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 NAP1L3Q99457 506 aaPredicted RBP6.83□□□□□ -1.32
PDPN-205ENST00000487038 SERPINI1Q99574 410 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CACNG6Q9BXT2 260 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 TRIM2Q9C040 744 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 DSN1Q9H410 356 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 RHOJQ9H4E5 214 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 C12orf49Q9H741 205 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 MANSC1Q9H8J5 431 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 ZBTB26Q9HCK0 441 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 AHSPQ9NZD4 102 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 TXNDC16Q9P2K2 825 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 ASIC3Q9UHC3 531 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 PSME2Q9UL46 239 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 CLEC4AQ9UMR7 237 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 ABCG2Q9UNQ0 655 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 PCNX3Q9H6A9 2034 aa6.83□□□□□ -1.32
PDPN-205ENST00000487038 GOLGA6L10A0A0M3HER8 536 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 LOC100289279A0A1B0GTE1 492 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SUPT3HB4E1H0 165 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 H0YIV9 168 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 KCNAB3O43448 404 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 TSPAN2O60636 221 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SUPT3HO75486 399 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 CBX7O95931 251 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 GBAP04062 536 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 PABPC4LP0CB38 370 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 ZNF17P17021 662 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 CSNK2A2P19784 350 aaPredicted RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 S1PR1P21453 382 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 AGTR1P30556 359 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 CXCR5P32302 372 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ELK3P41970 407 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 GPX6P59796 221 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 IRF9Q00978 393 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 FRG1Q14331 258 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 OR4D1Q15615 310 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ERCC6LQ2NKX8 1250 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 TCHHL1Q5QJ38 904 aaPredicted RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 PDSS1Q5T2R2 415 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SFRP5Q5T4F7 317 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SLC48A1Q6P1K1 146 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 TRMT10BQ6PF06 316 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 FAM111BQ6SJ93 734 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 CCDC25Q86WR0 208 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 TMEM139Q8IV31 216 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 WDR75Q8IWA0 830 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 SPATA6LQ8N4H0 392 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ZNF525Q8N782 197 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 BANPQ8N9N5 519 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 OR2M3Q8NG83 312 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 UHMK1Q8TAS1 419 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 STAG3L4Q8TBR4 150 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 UBTD2Q8WUN7 234 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 KISS1RQ969F8 398 aaPredicted RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 KLHL29Q96CT2 875 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ERP27Q96DN0 273 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 REXO5Q96IC2 774 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 PIMREGQ9BSJ6 248 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 DDX47Q9H0S4 455 aaKnown RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 FOLH1BQ9HBA9 442 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 HHATLQ9HCP6 504 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 CBLN4Q9NTU7 201 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 FBXO34Q9NWN3 711 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SENP1Q9P0U3 644 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ZNF639Q9UID6 485 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ADAM29Q9UKF5 820 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 POU2F3Q9UKI9 436 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 GPR55Q9Y2T6 319 aaPredicted RBP6.82□□□□□ -1.32
PDPN-205ENST00000487038 OR10H1Q9Y4A9 318 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 PSAT1Q9Y617 370 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 ZNF780BQ9Y6R6 833 aa6.82□□□□□ -1.32
PDPN-205ENST00000487038 SYCE1LA8MT33 242 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 H7C417 338 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 NDUFS8O00217 210 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 FOXE1O00358 373 aaPredicted RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 ABCD4O14678 606 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 GCM2O75603 506 aaPredicted RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 CD8AP01732 235 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 APEHP13798 732 aaKnown RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 ITGA2P17301 1181 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 ME2P23368 584 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 TTKP33981 857 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 FEN1P39748 380 aaKnown RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 ARL1P40616 181 aaPredicted RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 PIK3CGP48736 1102 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 FNTAP49354 379 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 EMDP50402 254 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 ZNF75DP51815 510 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 MAPK12P53778 367 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 GAS1P54826 345 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 PSMD4P55036 377 aaKnown RBP6.81□□□□□ -1.32
PDPN-205ENST00000487038 C21orf58P58505 322 aa6.81□□□□□ -1.32
PDPN-205ENST00000487038 IRX1P78414 480 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms