RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 OR9I1Q8NGQ6 314 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 RP9Q8TA86 221 aaKnown RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PAQR8Q8TEZ7 354 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 XAGE5Q8WWM1 108 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 HOXB13Q92826 284 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 VPS33AQ96AX1 596 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 RMND5BQ96G75 393 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 SLC35A4Q96G79 324 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 SIGLEC12Q96PQ1 595 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 ADOQ96SZ5 270 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 NPAS2Q99743 824 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 DOHHQ9BU89 302 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 TBL1XR1Q9BZK7 514 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 ARMC7Q9H6L4 198 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 ANKRA2Q9H9E1 313 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 EFCAB1Q9HAE3 211 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 TPT1P8Q9HAU6 139 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 POLE3Q9NRF9 147 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 UBQLN4Q9NRR5 601 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 SIRT3Q9NTG7 399 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 KLRF1Q9NZS2 232 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PCDHGA10Q9Y5H3 936 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 C5orf58C9J3I9 102 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 FAM47E-STBD1D6RA91 191 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 K7EM74 188 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CLIC1O00299 241 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 MAN1A2O60476 641 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 NADKO95544 446 aaPredicted RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 GSNP06396 782 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 NGFRP08138 427 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 GUSBP08236 651 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 NR2F1P10589 423 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CRATP43155 626 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 RFX3P48380 749 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CASP6P55212 293 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 FBXW4P57775 412 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PHC1P78364 1004 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PSG6Q00889 435 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ALDH6A1Q02252 535 aaKnown RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 RBPJQ06330 500 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SF3A3Q12874 501 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 KLF10Q13118 480 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 FADDQ13158 208 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 DUSP8Q13202 625 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ART3Q13508 389 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 NFYCQ13952 458 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 INPP5JQ15735 1006 aaPredicted RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZSWIM7Q19AV6 140 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.191e-7■■□□□ 13.4
SF3A1-208ENST00000485618 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SAXO2Q658L1 398 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 TMEM81Q6P7N7 255 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PIGWQ7Z7B1 504 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 FUNDC1Q8IVP5 155 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SULF2Q8IWU5 870 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 DPP10Q8N608 796 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZFP62Q8NB50 900 aaPredicted RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SLC16A11Q8NCK7 471 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CCDC197Q8NCU1 140 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 OR5AK3PQ8NH89 298 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 CPT1CQ8TCG5 803 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SPPL2AQ8TCT8 520 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 C10orf82Q8WW14 230 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 GTF2H4Q92759 462 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 MIB2Q96AX9 1013 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 C16orf58Q96GQ5 468 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF597Q96LX8 424 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PSMG3-AS1Q96PY0 264 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 OR7D2Q96RA2 312 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 YIPF4Q9BSR8 244 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ANGPTL4Q9BY76 406 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PTGES2Q9H7Z7 377 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 IL1RL2Q9HB29 575 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 OLAHQ9NV23 265 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 GPATCH2Q9NW75 528 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 STOML1Q9UBI4 398 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 P2RX2Q9UBL9 471 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 PRDM4Q9UKN5 801 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF232Q9UNY5 417 aa7.6□□□□□ -1.19
SF3A1-208ENST00000485618 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.6□□□□□ -1.19
SF3A1-208ENST00000485618 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 C15orf38-AP3S2A0A0A6YYH1 394 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 LOC100653049A0A140TA62 436 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 PRAMEF25A6NGN4 478 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 C9JVG2 144 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 GTPBP1O00178 669 aaKnown RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 TFECO14948 347 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 TSPAN2O60636 221 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 SHOX2O60902 331 aaPredicted RBP7.59□□□□□ -1.19
SF3A1-208ENST00000485618 UGT2B11O75310 529 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 CBR3O75828 277 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 KRT34O76011 436 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 KCNK2O95069 426 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 AGFG2O95081 481 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF24P17028 368 aa7.59□□□□□ -1.19
SF3A1-208ENST00000485618 TBXA2RP21731 343 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms